CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM2_MAIZE (Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays GN=SODA.1 PE=2 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 2.233e-87 Identity = 152/212 (71.70%), Postives = 170/212 (80.19%), Query Frame = 3 Query: 66 GLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 G + RG+ TV LPDL YD+ ALEP ISGEIM+LHHQ+ H YV NYNKA+EQL + K D S VVQLQGAIKFNGGGH NHSIFW+NL P+ EGG EPPH LGWAID FGS EAL+++M+AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 18 GAARPSAASARGVTTVALPDLSYDFGALEPVISGEIMRLHHQKHHATYVVNYNKALEQLDAVVVKGDASAVVQLQGAIKFNGGGHFNHSIFWENLKPISEGG-EPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 228
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.468e-64 Identity = 119/214 (55.61%), Postives = 146/214 (68.22%), Query Frame = 3 Query: 57 KAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 K +G +R + TLPDLPYDY AL P IS EIM LHH++ HQ YV N N A+++L A + D + ++ LQ AIKFNGGGHVNHSIFW NLAP ++ GG P L AI+ +GS+E LI+KMSAE A+QGSGW WLG D RLV++T NQDPL VPLLGIDVWEHAYYL YKNV+ DY+KNIW ++NWK ++ Y Sbjct: 10 KKVGESNGLRNFGSQSNSYTLPDLPYDYGALSPVISPEIMTLHHKKHHQTYVNNLNIALDKLSSASSAKDVAQMIALQSAIKFNGGGHVNHSIFWTNLAPKNQDGGVAPSGPLADAINKQYGSIEKLIEKMSAETTAIQGSGWGWLGYDKANDRLVIQTQQNQDPLSVSG--YVPLLGIDVWEHAYYLDYKNVRADYVKNIWQIVNWKNVAERY 221
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MOUSE (Superoxide dismutase [Mn], mitochondrial OS=Mus musculus GN=Sod2 PE=1 SV=3) HSP 1 Score: 227.639 bits (579), Expect = 5.730e-59 Identity = 112/195 (57.44%), Postives = 137/195 (70.26%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N E+ +AL K D +T V LQ A+KFNGGGH+NH+IFW NL+P +GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQVALQPALKFNGGGHINHTIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_RAT (Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus GN=Sod2 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 7.484e-59 Identity = 113/195 (57.95%), Postives = 135/195 (69.23%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 +LPDLPYDY ALEP I+ +IMQLHH + H YV N N E+ +AL K D +T V LQ A+KFNGGGH+NHSIFW NL+P +GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ S Y Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHATYVNNLNVTEEKYHEALAKGDVTTQVALQPALKFNGGGHINHSIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVSQRY 217
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MACFA (Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis GN=SOD2 PE=2 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 6.335e-58 Identity = 116/218 (53.21%), Postives = 142/218 (65.14%), Query Frame = 3 Query: 54 RKAIGLGKSVRLGLRGL---QTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 R G G+ + L L Q +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 4 RAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MACNE (Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina GN=SOD2 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.274e-58 Identity = 116/218 (53.21%), Postives = 142/218 (65.14%), Query Frame = 3 Query: 54 RKAIGLGKSVRLGLRGL---QTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 R G G+ + L L Q +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 4 RAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKYKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACLNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_BOVIN (Superoxide dismutase [Mn], mitochondrial OS=Bos taurus GN=SOD2 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.274e-58 Identity = 112/198 (56.57%), Postives = 135/198 (68.18%), Query Frame = 3 Query: 105 QTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 Q +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N A E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGE P L AI FGS +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ + Y Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVAEEKYREALEKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGE-PQGELLEAIKRDFGSFAKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTARY 217
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MACMU (Superoxide dismutase [Mn], mitochondrial OS=Macaca mulatta GN=SOD2 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.411e-57 Identity = 110/195 (56.41%), Postives = 134/195 (68.72%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MACFU (Superoxide dismutase [Mn], mitochondrial OS=Macaca fuscata fuscata GN=SOD2 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.411e-57 Identity = 110/195 (56.41%), Postives = 134/195 (68.72%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E +L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGFNKERGQLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 221.861 bits (564), Expect = 3.144e-57 Identity = 110/198 (55.56%), Postives = 134/198 (67.68%), Query Frame = 3 Query: 105 QTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 Q +LPDLPYDY ALEP I+ +IMQLHH + H AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |