CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36 Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 + LPDLPY Y ALEP I E M LHH + H YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+A FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36 Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 + LPDLPY Y ALEP I E M LHH + H YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+A FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36 Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 + LPDLPY Y ALEP I E M LHH + H YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+A FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_PASHA (Superoxide dismutase [Mn] OS=Pasteurella haemolytica GN=sodA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36 Identity = 86/209 (41.15%), Postives = 119/209 (56.94%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 707 TLP+L Y Y ALEP + M++HH + HQAY+ N N A+E + L K + + L A++ N GGHVNH++FWK L G +L AI+ FGS+EA + GSGW WL L E +L V +TANQD PL+ K V P+L +DVWEHAYYL Y+N +PD++K WNV+NW A+ ++++ Sbjct: 4 TLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALEAHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKT-----GTTLQGALKEAIERDFGSVEAFQSEFEKAATTRVGSGWAWLVL--EEGKLAVVSTANQDNPLMGKEVAGVSGYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEK 205
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.373e-36 Identity = 83/203 (40.89%), Postives = 116/203 (57.14%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 TLP LPY Y ALEP + M++HH + HQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P++G+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.373e-36 Identity = 81/203 (39.90%), Postives = 115/203 (56.65%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVE-------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LP LPY +ALEP I M +HH + H YVT N A+E + +AL + ++ A++ NGGGH NH++FW+ L+P GG P L AI+A FGS + +K + A GSGW WL ++ +L + +T NQD + + T P+LG+DVWEHAYYL Y+N +PDY+ WNV+NW + Y + Sbjct: 5 LPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLDAVPENIRTAVRNNGGGHANHTLFWQILSP---NGGGAPTGELADAINAEFGSFDQFKEKFADAAANRFGSGWAWLVVNDG--KLEITSTPNQDTPLMEGKT--PILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVAKRYNE 200
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_EPTST (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Eptatretus stoutii PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.794e-36 Identity = 81/147 (55.10%), Postives = 98/147 (66.67%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 599 IS EIMQLHH + H AYV N N E+L +AL K D +T V LQ A +FNGGGH+NHSIFW+NL+P GGG+P L AI+ FGS++ L +K+ A +QGSGW WLG + E KRL + T ANQDPL L PLLGIDV Sbjct: 2 ISAEIMQLHHSKHHAAYVNNVNVVEEKLAEALGKGDVNTQVSLQPAFRFNGGGHINHSIFWRNLSP--SGGGQPCGDLLK-AIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKESKRLQIATCANQDPL-QGTTGLFPLLGIDV 144
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.060e-36 Identity = 85/201 (42.29%), Postives = 114/201 (56.72%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGA-------IKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 LP LPY Y ALEP I M++HH + HQ YV N N A+E A V+ S + QL G + NGGGH NHS+FW ++P +GGG P LG AID G EA + GSGW WL + T L+VE++ NQD + T P+LG+DVWEHAYYL+Y+N +P+Y+ +NV++W+ + Y Sbjct: 5 LPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTPYAEQPVE-SLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSP--QGGGRPD-GDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSV-TPQGSLLVESSGNQDSPLMNGNT--PILGLDVWEHAYYLKYQNRRPEYIGAFYNVIDWREVARRY 198
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 3.996e-36 Identity = 83/203 (40.89%), Postives = 115/203 (56.65%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 TLP LPY Y ALEP + M++HH + HQ YV N N A+E L + + + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFASLPVEELITKLDQVPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 3.996e-36 Identity = 83/203 (40.89%), Postives = 115/203 (56.65%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 TLP LPY Y ALEP + M++HH + HQ YV N N A+E L + + + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++N +PDY+K WNV+NW A+ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFADLPVEELITKLDQVPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |