CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 2.052e-32 Identity = 79/196 (40.31%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAV---EQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYAS 689 LP+LPYDY+ALEP IS ++ HH + H AYV N+N AV + Q++ V + A FN NHS +W + P GGG P +L I+A FGS +A ++ GA GSGW WL LD L V T N + +T T PLL +DVWEHAYYL Y+N +PDY+ + + ++NW + + Sbjct: 5 LPNLPYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTDLDNQSIEDVIKAVAGDASKAGIFNNAAQAWNHSFYWNCMKP---GGGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSGWAWLVLDN--GTLKVTKTGNAENPMTAGQT--PLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVA 193
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.971e-32 Identity = 79/198 (39.90%), Postives = 106/198 (53.54%), Query Frame = 3 Query: 108 TVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 T L LPY AL P IS E ++ HH + + YV N NK + + D +T+VQ +G I N G +NH++++ P G G P LG AID FGS E ++ + G L GSGWVWL D K L +E N V K L PLLG DVWEHAYYL Y+N + D+LK++W++++W Y Sbjct: 2 THELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLI--IGTEFENADLNTIVQKSEGGIFNNAGQTLNHNLYFTQFRP---GKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANGK-LSIEKEPNAGNPVRKG--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIVDWDIVESRY 191
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_BUCAP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sodA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.330e-31 Identity = 76/202 (37.62%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 +LPDL Y Y+ALEP E M++HH + HQ Y+ N N +E+ + L + ++ + ++ N GGH+NHS+FWK L G L I+ FGS+E K GSGW+WL +V +T NQD PL+ K+ + P+ G+D+WEHAYYL+Y+N + DY+K+ WNV+NW AS Sbjct: 4 SLPDLSYAYNALEPFFDEETMRIHHTKHHQNYINNTNSILERTNFSSLSIEELMSIFNEISLENKNVLRNNAGGHINHSLFWKGLKI-----GTILQGDLKSEINKQFGSVEYFKSKFEDIALNHFGSGWIWLVNQNGILSIV--STINQDNPLMGKSISGTHGNPIFGLDLWEHAYYLKYQNRRLDYIKSFWNVVNWDEAS 198
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31 Identity = 79/199 (39.70%), Postives = 102/199 (51.26%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL---FQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVY 698 LP LP+DY+AL P I+ E ++ HH + H AYV NYN AV+ Q + V + A FN NHS +W ++ P GG P +L I A FGS E + + A GSGW WL LD L + T N D + T PLL IDVWEHAYYL Y+N +PDY+ + + NW +AS Y Sbjct: 5 LPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDLDGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKP---NGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLVLDN--GTLKITKTGNADTPIAHGQT--PLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANY 196
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_ACIAM (Superoxide dismutase [Fe] OS=Acidianus ambivalens GN=sod PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.622e-31 Identity = 75/204 (36.76%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 102 LQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 L+ LP LPY+ ALEP IS EI+ +H+ H+ YV N V+++ + L +S +QG ++ FN GH HS++W+N+AP +GGG+P +G I+ +GS E + +L G+GW L + E L + T N L LL +D +EHAYYLQYKN + DY+ N WN++NW +A Q+ Sbjct: 7 LKKYELPPLPYNLDALEPYISKEIIDVHYNGHHRGYVNGANSFVDRVNKILKGEISSGQYDIQGLLRGLVFNINGHKLHSLYWQNMAPAGKGGGKPG-GVIGDLIEKQYGSFEKFKALFTEAANSLPGTGWTVLYYEVENGNLQIMTFENH--FQNHIAELPILLILDEFEHAYYLQYKNKRADYVNNWWNLVNWDFADKKLQQ 207
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.126e-30 Identity = 73/193 (37.82%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 TLP LPY AL P IS E ++ H+ + HQ YVTN N + + +V+ FN V NH+ +W +L+P GGGEP +L AI A +GS++A + + A GSGW WL + +V T+ PL T L L DVWEHAYY+ Y+N +P YL+N W ++NW++A+ Sbjct: 4 TLPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGT--EFENLSLEEIVKKSSGGVFNNAAQVWNHTFYWNSLSP--NGGGEPS-GALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKKADGTLDIVNTSNAATPLTTADKAL---LTCDVWEHAYYIDYRNARPKYLENFWALVNWEFAA 188
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_KLEPL (Superoxide dismutase [Fe] (Fragment) OS=Klebsiella planticola GN=sodA PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30 Identity = 72/173 (41.62%), Postives = 97/173 (56.07%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 617 LP LPY Y ALEP I + ++HH + H YVTN N AVE A ++ + Q A++ NGGGH NH++FW+ +AP GG P + AIDA FGS +A ++ + GSGW WL +D + + V +T NQD V + T P+LG+DVWEHAYY Sbjct: 5 LPQLPYAYDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFADKDINDLIAMLDALPADKQTAVRNNGGGHANHTLFWEVIAP---GGSNTPVGEVAKAIDAKFGSFDAFKEEFAKAATTRFGSGWAWLIVDGD--SVAVTSTPNQDSPVMEGKT--PVLGLDVWEHAYY 170
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30 Identity = 72/195 (36.92%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 108 TVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL-FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 T TLP LPY AL P +S E ++ H+ + H YVTN NK + F+++ + +++ +G I N NH+ +W +++P GGGEP L AI+ FGS A ++ S A GSGW WL D ++ T+ P+ L LL DVWEHAYY+ Y+N +PDY++ W+++NW +AS Sbjct: 2 TFTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEFESMTLEEI--IMKAKGGIFNNAAQVWNHTFYWHSMSP--NGGGEPK-GRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLVQDQSGALKIINTSNAGTPMTEG---LNALLTCDVWEHAYYIDYRNRRPDYIEAFWSLVNWDFAS 188
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.921e-30 Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQ----LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVYQ 701 LP+LPYDY AL P +S E ++ HH + H AYVTN NK E+ L+ + +V+ + N G H NH FWK + GGG L AI + G + SA GA GSGW WL + K + +T ++PLV A P+LG+DVWEH+YY+ Y+N +P YL+ + N++NW Y ++Y+ Sbjct: 5 LPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEE--AGLSDLSLEDIVKKSYGTNQPLFNNAGQHYNHVHFWKWMK--KGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGSGWAWLSVKNG-KLEISKTPNGENPLVHGA---TPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYE 196
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_SULAC (Superoxide dismutase [Fe] OS=Sulfolobus acidocaldarius GN=sod PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 3.277e-30 Identity = 76/204 (37.25%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 102 LQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 L+ P LPY ALEP IS +I+ +H+ H+ YV N +++L + + LQG ++ FN GH H+I+W N+AP +GGG+P +L I+ +GS + Q S +L GSGW L D E L + T N + L +L +D +EHAYYLQYKN + DYL WNV+NW A QK Sbjct: 7 LKRYEFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLLDRLEKLIKGDLPQGQYDLQGILRGLTFNINGHKLHAIYWNNMAPAGKGGGKPG-GALADLINKQYGSFDRFKQVFSESANSLPGSGWTVLYYDNESGNLQIMTVENH--FMNHIAELPVILIVDEFEHAYYLQYKNKRGDYLNAWWNVVNWDDAEKRLQK 207 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |