CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.731e-29 Identity = 71/192 (36.98%), Postives = 101/192 (52.60%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 LP LPY AL P IS E ++ H+ + HQ YVTN N ++ A +++ FN V NH+ +W LAP GGEP + AI A FGS + + GSGW WL +++ K +V T+ PL T A PLL +DVWEHAYY+ Y+N +P YL++ W ++NW++ + Sbjct: 5 LPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGT--AFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAP--NAGGEPT-GKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDA---TPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVA 188
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.179e-29 Identity = 69/204 (33.82%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LP+L YDY A+EP I + M++HH + H +V N N +E++ + ++ D S ++ + Q I+ N GG+ NH+++++ L P G + I+A FGSL+ L + + GSGW WL L E V+ PL+ + P+LGIDVWEHAYYL+Y+N + +Y+ +NW+ S VY + Sbjct: 4 LPELGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMN---SYKPILGIDVWEHAYYLKYQNRRIEYVDAFLKALNWEEVSKVYNE 200
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28 Identity = 70/191 (36.65%), Postives = 100/191 (52.36%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 LP LPY+ +ALEP IS E ++ HH + H YV N N + + K V G I N NH+ +W L+P GGG+P +L AI+A FGS + ++ + GSGW WL + + T +PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + + Sbjct: 5 LPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGT-EFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGNPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWDFVA 188
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_PALVU (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Palinurus vulgaris PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 599 IS IMQ+HH + HQAY+ N E+L QA D + + L AIKFNGGGH+NH+IFW N+AP GGEP + AI FGS +A K S ++GSGW WLG + +L V T NQDPL L+PLLG+DV Sbjct: 2 ISEMIMQIHHTKHHQAYINNLKACTEKLKQAEQANDVAAMNALLPAIKFNGGGHINHTIFWTNMAP--SAGGEPA-GPVADAITKEFGSFQAFKDKFSTASVGVKGSGWGWLGYCPKNDKLAVATCQNQDPL-QLTHGLIPLLGLDV 144
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28 Identity = 70/195 (35.90%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP LPY + AL+P IS E ++ HH + H YV N N V + K V G I N NH+ +W L+P GGG+P +L AI+A FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 5 LPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 5.231e-28 Identity = 70/195 (35.90%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP LPY + AL+P IS E ++ HH + H YV N N V + K V G I N NH+ +W LAP GG+P +L AI+A FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 5 LPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKTSSGGIFNNAAQVWNHTFYWNCLAP--NAGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28 Identity = 70/199 (35.18%), Postives = 101/199 (50.75%), Query Frame = 3 Query: 108 TVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 T +P LPY +ALEP IS + + H+ + Q YV N N V V+ GAI N G +NH++++ AP + P LG AI FGS E ++ +A L GSGW WL +D + K + + +P+ L PLLG DVWEHAYYL Y+N + D++ +W +++W DV +K Sbjct: 2 TYEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEYEGKTVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAP--KPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDKDGKLHITKEPNGSNPV---RAGLKPLLGFDVWEHAYYLDYQNRRADHVNKLWEIIDW----DVVEK 191
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 692 LPDLPYD + +P + E HH + H AYV N N ++ + L K D ++ Q A FN + NHS FW ++ P +GGG+P L I+ FGS E ++ E GSGW WL RL + TAN + + PLL DVWEHAYY+ Y+N +PDY+ I +++NWK+ D Sbjct: 16 LPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDK-EELQKKDLEEIIEWSSQNSNAAIFNNAAQIWNHSFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVYHDN--RLQIIKTANAGTPIANG--MKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ + H YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ + H YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |