CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ + H YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ + H YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY+ Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_HALMA (Superoxide dismutase [Mn] OS=Haloarcula marismortui GN=sod PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.554e-27 Identity = 71/196 (36.22%), Postives = 96/196 (48.98%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LP LPYDY ALEP IS +++ HH HQ YV A E L + + D + G + NG GH H++FW+N+ P GGGEP L I+ FGS E K E AA GW L D K+L D P+L +DVWEH+YY Y + D++ + V++W A++ Y+K Sbjct: 9 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGLESAEETLAENRDAGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYEG--WKGEFEAAASAAGGWALLVYDPVAKQLRNVPVDKHDQGALWGSH--PILALDVWEHSYYYDYGPARGDFIDAFFEVVDWDKAAEEYEK 197
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.288e-26 Identity = 70/195 (35.90%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYN---KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 692 LP LPY Y+ALEP IS E ++ HH + H YV N K EQ + L ++ Q AI N NH+ +WK + G G P L + A FG LE +K + + GSGW WL ++ + K +++T +P+ + PLL DVWEHAYY+ +N + YL++ WNV+NWK+ + Sbjct: 5 LPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTEQEHKTLEELIKQKPTQ---AIYNNAAQAWNHAFYWKCMC----GCGVKPSEQLIAKLTAAFGGLEEFKKKFTEKAVGHFGSGWCWL-VEHDGKLEIIDTHDAVNPMTNG---MKPLLTCDVWEHAYYIDTRNNRAAYLEHWWNVVNWKFVEE 188
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM1_HALSA (Superoxide dismutase [Mn] 1 OS=Halobacterium salinarium GN=sod1 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26 Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LP LPYDY ALEP IS +++ HH HQ YV +N A E L + D ++ G + NG GH+ H++FW++++P GG+ P +L I A FGS E + E AA SGW L D+ L N D P+L +DVWEH+YY Y + ++ + V++W ++ +++ Sbjct: 6 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGWNDAEETLAENRETGDHASTAGALGDVTHNGSGHILHTLFWQSMSP---AGGDEPSGALADRIAADFGSYEN--WRAEFEAAASAASGWALLVYDSHSNTLRNVAVDNHDEGALWGSH--PILALDVWEHSYYYDYGPDRGSFVDAFFEVVDWDEPTERFEQ 194
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.896e-26 Identity = 71/198 (35.86%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 692 LPDLPY+ + +P + E HH + H YV N N ++ + L K D ++ Q A FN + NH+ FW ++ P +GGG+P L I+ FGS E ++ E GSGW WL RL + TAN + A + PLL DVWEHAYY+ Y+N +PDY+ I +++NWK+ D Sbjct: 16 LPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDK-EELQKKDLEEIIEWSSQNSNAAIFNNAAQIWNHTFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEEFCEQFKQEAVGQFGSGWAWLIYHDN--RLQIIKTANAGTPI--AHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PLAMA (Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.896e-26 Identity = 67/198 (33.84%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 +TLP L Y +AL P IS E + H+ + H YV N ++ A K V + GAI N NH+ +W ++ P + GGEP H + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAY + Y+N + Y+K WN++NW +A++ +K Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGEP-HGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYCIDYRNDRASYVKAWWNLVNWNFANENLKK 194
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.352e-26 Identity = 69/198 (34.85%), Postives = 102/198 (51.52%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 692 LP+LPY+ + +P + E + HH + H AYV N N ++ + L K + ++ Q Q FN V NH+ FW ++ P GGG+P L I+ FGS E ++ AE GSGW WL RL + TAN + + PLL DVWEHAYY+ Y+N +PDY+ I +++NW++ + Sbjct: 16 LPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDK-EELQKKNLEEIIDWSSQNQNIAIFNNAAQVWNHTFFWHSIKP--NGGGKPSGKILK-QINEDFGSFEEFCEQFKAEATGQFGSGWAWLVYHNN--RLQIVKTANAGTPIANG--MQPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWEFVEN 205
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_PHOLE (Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.174e-25 Identity = 66/192 (34.38%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 LP LP+ +ALEP IS E ++ H+ + H YV N VE A ++ G FN V NH+ +W LAP GGEP + AI+ FGS K + GS W WL + +V T+ P+ + T PLL +D+WEHAYY+ Y+N++P Y+ W ++NW + S Sbjct: 4 LPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAEKSLEEIIKTSTGGV--FNNAAQVWNHTFYWNCLAP--NAGGEPT-GEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLVKNANGSLAIVNTSNAGCPITEEGVT--PLLTVDLWEHAYYIDYRNLRPSYMDGFWALVNWDFVS 188
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 3.174e-25 Identity = 71/199 (35.68%), Postives = 105/199 (52.76%), Query Frame = 3 Query: 126 LPYDYSALEP-AISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVYQK 704 LPYD++ALE + GE + H+ + H+AYV N NK + A ++ + + A K FN V NH+ FW +L P GG P I+ FGS + L ++ S A GSGW WL +D V +T ++PL A LL +DVWEHAYY+ ++N +P ++KN + N++NW +A+ Y K Sbjct: 8 LPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELADKSLEEVIQIAFKDASKAGIFNNAAQVWNHTFFWNSLKPA---GGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWL-IDDGGTLKVTKTPNAENPL---AHGQKALLTLDVWEHAYYIDFRNARPAFIKNYLDNLVNWDFAAANYAK 199 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |