CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20 Identity = 67/221 (30.32%), Postives = 102/221 (46.15%), Query Frame = 3 Query: 48 GIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAV---EQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGL----------------DTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYL 650 G++ G+ ++ G + L PY + LEP +S + ++ H + H+ YV N K V E ++L ++ ++ + FN V NH FW+ + P GGG P L I+ FGS + + A A GSGW WL D + K +V+++ +PLV PLL IDVWEHAYYL ++N +PDY+ Sbjct: 6 GLQNVSGINFLIKEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTELDGKSLEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKP---GGGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVWGG--YYPLLTIDVWEHAYYLDFQNRRPDYI 221
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCPH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium phlei GN=sodA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20 Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 186 HQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 611 H + H YV N A+ +L +A D + + + F+ GGHVNH+I+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA Sbjct: 2 HSKHHATYVKGVNDAIAKLEEARANGDHGAIFLHEKNLAFHLGGHVNHTIWWKNLSP---HGGDKPTGDLAAAIDDQFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGDRLLTFQLYDQQANVPLG--IIPLLLVDMWEHA 138
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STROR (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus oralis GN=sodA PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.291e-18 Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQL------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 593 I E M LHH + HQAYV N N A+E+ +AL S ++ A+ NGGGH+NH++FW+ + P P + L AIDA FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+ Sbjct: 2 IDAETMHLHHDKHHQAYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGL 145
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRMT (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus mitis GN=sodA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.758e-18 Identity = 57/151 (37.75%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQL------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 593 I E M LHH + HQ YV N N A+E+ +AL S ++ A+ NGGGH+NH++FW+ + P P + L AIDA FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+ Sbjct: 2 IDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGL 145
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRPA (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus parasanguis GN=sodA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17 Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 593 I E M LHH + HQ YV N N A+E+ L L V+ S ++ A+ NGGGH+NH++FW+ + P P + L AIDA FGS E +A GSGW W ++ E K L V +TANQD +++ T P+LG+ Sbjct: 2 IDEETMHLHHDKHHQTYVNNVNAALEKHPEIGEDLESLLADVE-SIPADIRQAVINNGGGHLNHALFWELMTPEQTA----PSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWSVVNKEGK-LEVTSTANQDTPLSEGKT--PILGL 145
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_AQUAE (Superoxide dismutase [Fe] OS=Aquifex aeolicus GN=sodB PE=3 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17 Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 IS E ++ H + ++ YV YN+ E+L N D S Q L+ FN G V H +++ LAP GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YKN +P Y+ + +NW ++ ++K Sbjct: 20 ISNEQIEPHFEAHYKGYVAKYNEIQEKLADQ-NFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLAP---GGKGEPSEALKKKIEEDLGGLDACTNELKA--AAIAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEK 200
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODF_AQUPY (Superoxide dismutase [Fe] OS=Aquifex pyrophilus GN=sodB PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.579e-16 Identity = 62/189 (32.80%), Postives = 92/189 (48.68%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 IS E ++ H + ++ YV YN+ E+L N D S Q L+ FN G V H +++ L P GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YKN +P Y+ + +NW ++ ++K Sbjct: 20 ISNEQIEPHFEAHYKGYVAKYNEIQEKLADQ-NFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLTP---GGKGEPSEALKKKIEEDIGGLDACTNELKA--AAMAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEK 200
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRSL (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus salivarius GN=sodA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.999e-16 Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 159 ISGEIMQLHHQRRHQAYVTNYNKAVEQL------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVT--KAPTL 575 I E M LHH + H YV N N A+E+ +AL ++ A+ NGGGH+NH++FW+ L+P + P + + AI+ FGS EA + +A GSGW WL ++ E K L V +TANQD ++ K P L Sbjct: 2 IDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVEQIPADIRQALINNGGGHLNHALFWELLSPEKQ----EPTAEVAAAINEAFGSFEAFQEAFTAAATTRFGSGWAWLVVNDEGK-LEVVSTANQDTPISDGKKPIL 143
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRPO (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus porcinus GN=sodA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15 Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 168 EIMQLHHQRRHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 593 E M LHH + H YV N N A+E ++ + L ++ D S + + ++ A+ NGGGH+NH++FW+ L+P S + AID FGS E+ + + GSGW WL ++ E K L V +TANQD +++ P+LG+ Sbjct: 5 ETMILHHDKHHATYVANANAALEKHPEIGENLEELLADVSAIPEDIRQALVNNGGGHLNHALFWELLSPEKT----EVTSDVASAIDEAFGSFESFKDAFTTAATSRFGSGWAWLVVNKEGK-LEVMSTANQDTPISEGKQ--PILGL 145
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRCB (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus canis GN=sodA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.633e-15 Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 168 EIMQLHHQRRHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTK 563 E M LHH + H YV N N A+E+ L + L V T ++ A+ NGGGH+NH++FW+ L+P + + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ Sbjct: 5 ETMTLHHDKHHATYVANANAALEKHPEIGENLKELLADV-TKIPADIRQALINNGGGHLNHALFWELLSPEKQ----EITADVAQAIDEAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISE 137 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |