CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_ONCVO (Superoxide dismutase [Mn], mitochondrial OS=Onchocerca volvulus GN=sod-2 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.250e-54 Identity = 109/219 (49.77%), Postives = 141/219 (64.38%), Query Frame = 3 Query: 48 GIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 G+ + +GK+ L + L+ V LPDLPYDY ALEP +S EIMQ+HH + H AYV N+A E++ +AL K DT V + FN GGH+NH++FW+ L V G P+S L AI FGSLE +I K++A+ A+QGSGW WL D E KRL + NQD L+ L+PL IDVWEHAYYLQYKN++PD++K IW + NWK SD Y K Sbjct: 6 GVAGRLLVGKNYCLNTQRLKHV-LPDLPYDYGALEPILSAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVAGTKLMNFNTGGHINHTLFWEGLTAVKNSG--EPNSELMTAIKKDFGSLETMIDKLNAKTIAIQGSGWGWLAYDKEMKRLQLACCPNQD-LLEPTTGLIPLFCIDVWEHAYYLQYKNLRPDFVKAIWKIANWKIISDRYIK 220
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 5.550e-54 Identity = 106/193 (54.92%), Postives = 132/193 (68.39%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 692 TLPDLP+DY+ LEP IS EIMQLHHQ+ H YV N N+ E+L +A++K + + LQ A+KFNGGGH+NHSIFW NLA + GGEP + I FGSL+ L +++S A+QGSGW WLG + K L + T ANQDPL +VPL GIDVWEHAYYLQYKNV+PDY+ IW + NWK S+ Sbjct: 27 TLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQPALKFNGGGHINHSIFWTNLA---KDGGEPSKELMD-TIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPL----EGMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISE 211
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CHLTR (Superoxide dismutase [Mn] OS=Chlamydia trachomatis GN=sodA PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.109e-53 Identity = 98/190 (51.58%), Postives = 132/190 (69.47%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 683 LP LPYDY ALEP IS EIMQLHHQ+ HQ Y+ N N+A++ L A D + ++ + A++FNGG H+NHS+FW+ LAP +GGG PP L I+ +GS + ++ AA+QGSGW WL + + L+V+TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLK+ +++NW Y Sbjct: 8 LPALPYDYDALEPVISAEIMQLHHQKHHQGYINNLNEALKSLDVANATQDLARLIAINPALRFNGGSHINHSLFWEMLAPQGKGGGVPPRHELLKLIEKFWGSFDNFLKNFITSSAAVQGSGWGWLAFCPQKQELMVQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARMDYLKSFPSIINWDY 195
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.109e-53 Identity = 109/196 (55.61%), Postives = 133/196 (67.86%), Query Frame = 3 Query: 87 LGLRGL-QTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVM 671 LG+ G+ Q +LPDLPYDY AL+P I+ EIMQLHH + H AY+ N N A E+ +AL K D + V LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + +NQDPL L+PLLGIDVWEHAYYLQ KNV+PDYLK IW V+ Sbjct: 17 LGILGVRQKHSLPDLPYDYGALQPHINAEIMQLHHSKHHAAYLNNLNIAEEKYQEALAKGDVTAQVALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAVSVGVQGSGWGWLGFNKERGCLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQLKNVRPDYLKAIWKVI 208
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 207.994 bits (528), Expect = 4.698e-53 Identity = 103/205 (50.24%), Postives = 139/205 (67.80%), Query Frame = 3 Query: 90 GLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 G+RG T LP LPYDY+ALEP I EIM+LHHQ+ HQ YV N N A EQL +A +K DT+ ++QL A++FNGGGH+NH+IFW+NL+P P L AI++ + SLE ++++ A+QGSGW WLG + + +L + NQDPL + L+PL GIDVWEHAYYLQYKNV+P Y++ IW++ NW S +Q+ Sbjct: 14 GVRGKHT--LPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP----NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPL-EASTGLIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIANWDDISCRFQE 211
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.045e-52 Identity = 111/203 (54.68%), Postives = 137/203 (67.49%), Query Frame = 3 Query: 96 RGLQT-VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS-SLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 RG+ T TLP LPY Y+ALEPA+S IM+LHH + HQ YV N N A E+L A +D V LQ AIKFNGGGH+NHS+FWK LAP EGGG+P S SL AI + +GSLE ++M+A A++QGSGW WL +D + L + TTANQD +V P ++GID WEHAYY QY+N K +Y K IWNV+NWK A Y Sbjct: 20 RGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKL--ADPNLDLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNAALASIQGSGWAWLIVDKDGS-LRITTTANQDTIVKSKP----IIGIDAWEHAYYPQYENRKAEYFKAIWNVINWKEAESRY 215
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CHAFE (Superoxide dismutase [Mn], mitochondrial OS=Charybdis feriatus PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.157e-51 Identity = 111/194 (57.22%), Postives = 133/194 (68.56%), Query Frame = 3 Query: 75 KSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLK 653 +S+R GL Q TLPDLPYDY ALEP IS EIMQLHH + HQ YV N N A E+L +A K D ST++ L A++FNGGGH+NHSIFW+NL+ GGEP L AI+ FGS+E + ++SA+ A+QGSGW WLG E L + T NQDPL +A T LVPL GIDVWEHAYYLQYKNV+ LK Sbjct: 10 RSLRAGLWCRQKHTLPDLPYDYGALEPTISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAKEKGDVSTIISLAPALRFNGGGHINHSIFWQNLS---ADGGEPEGELLA-AINRDFGSVENMKNQLSAQTVAVQGSGWGWLGYIAE-GALQIATCPNQDPL--EATTGLVPLFGIDVWEHAYYLQYKNVRRIMLK 196
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.744e-51 Identity = 98/194 (50.52%), Postives = 135/194 (69.59%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPP--HSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 686 +LP+L Y++SA EP ISG+I ++H+ + HQ YV N N ++EQ +A +K + +V L+ AI FNGGG++NH ++WKNLAPV +GGG+PP S LG I FGSL+ LI+ + + A +QGSGW ++ + + V TTANQD + P LVPL+ ID WEHAYYLQY+NVK DY KN+W+V+NWK A Sbjct: 37 SLPELDYEFSATEPYISGQINEIHYTKHHQTYVNNLNASIEQAVEAKSKGEVKKLVALEKAINFNGGGYLNHCLWWKNLAPVSQGGGQPPSEDSKLGKQIVKQFGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDTIDVITTANQDTVTD--PNLVPLIAIDAWEHAYYLQYQNVKADYFKNLWHVINWKEA 228
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.797e-51 Identity = 100/194 (51.55%), Postives = 133/194 (68.56%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHE----GGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 686 LPDLPY Y+ALEP IS +IM+LHH++ HQ YV + N A + +A + + LQ A+KFNGGGH+NHS+FWKNLAP GG L AI+ ++GS++ I++ +A AA+QGSGW WLGL+ KRL + TTANQDPL++ VP++G+D+WEHA+YLQY NVK DYL IW V+N+K A Sbjct: 5 LPDLPYAYNALEPFISQQIMELHHKKHHQTYVNSLNAAEQAYAKASTPKER---IALQSALKFNGGGHINHSLFWKNLAPAKSEGKGNGGALADGPLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLGLNPATKRLEITTTANQDPLLSH----VPIIGVDIWEHAFYLQYLNVKADYLAAIWIVINFKEA 191
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.668e-48 Identity = 101/202 (50.00%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKV--------DTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 689 VTLPDL +D+ ALEP ISG+I +LH+ + HQ YV +N AV+Q FQ L+ + + ++ +Q IKF+GGG NH +FW+NLAP +GGGEPP +L AID FGSL+ LI+ + + A +QGSGW ++ + + +L V T NQD T LVPL+ ID WEHAYYLQY+N K DY K IWNV+NWK AS Sbjct: 28 VTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ-FQELSDLLAKEPSPANARKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD---TVTGPLVPLVAIDAWEHAYYLQYQNKKADYFKAIWNVVNWKEAS 225 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |