CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCFO (Superoxide dismutase [Mn] OS=Mycobacterium fortuitum GN=sodA PE=3 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44 Identity = 92/195 (47.18%), Postives = 120/195 (61.54%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 TLPDL YDY ALEP ISG+I +LHH + H AYV N AV +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW+ + Y Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHAAYVKGVNDAVAKLDEARANGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGDRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWEDVQNRY 194
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCLE (Superoxide dismutase [Mn] OS=Mycobacterium leprae GN=sodA PE=3 SV=3) HSP 1 Score: 177.948 bits (450), Expect = 5.207e-44 Identity = 91/188 (48.40%), Postives = 119/188 (63.30%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 TLPDL +DY+ALEP ISGEI ++HH + H AYV N A+ +L +A K D S + + + F+ GGHVNHSI+WKNL+P GG+ P L ID FGS + + SA LQGSGW LG DT +L+ +Q V+ ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 5 TLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 8.882e-44 Identity = 93/204 (45.59%), Postives = 129/204 (63.24%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LPDL Y Y ALEP I + M++HHQ+ H AYVTN N A+E+ + L+ V+ +++ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 7 LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 8.882e-44 Identity = 93/204 (45.59%), Postives = 129/204 (63.24%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 LPDL Y Y ALEP I + M++HHQ+ H AYVTN N A+E+ + L+ V+ +++ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 7 LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CORDI (Superoxide dismutase [Mn] OS=Corynebacterium diphtheriae GN=sodA PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 8.882e-44 Identity = 96/191 (50.26%), Postives = 116/191 (60.73%), Query Frame = 3 Query: 108 TVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 T LP+L Y Y ALEP I+ EIM+LHH + H YV N A+E+L +A + VV L + FN GGH NHSIFWKNL+P GGGEP +L AI FGS E SA LQGSGW LG D RLV+E +Q ++ L PLL +D+WEHA+YLQYKNVK DY+K +WNV NW Sbjct: 2 TYALPELDYAYDALEPHIAAEIMELHHSKHHANYVNGANAALEKLQKARENGEIGAVVTALSKDLAFNLGGHTNHSIFWKNLSP--NGGGEPT-GALAEAIAKEFGSFEKFKDHFSAAALGLQGSGWAVLGYDHIGGRLVIEQLTDQQGNISA--NLTPLLMLDMWEHAFYLQYKNVKADYVKAVWNVFNW 187
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.515e-43 Identity = 92/202 (45.54%), Postives = 123/202 (60.89%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL-------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP+L Y Y ALEP I M++HHQ+ H AYVTN N A+E+ + L + T+ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG AL +K++ GSGW WL D F +L V +TANQD V P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A ++Y+ Sbjct: 7 LPELGYPYEALEPHIDARTMEIHHQKHHGAYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVISTANQDNPVMGG--FAPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEIYK 202
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCSM (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=4) HSP 1 Score: 174.481 bits (441), Expect = 5.757e-43 Identity = 88/188 (46.81%), Postives = 116/188 (61.70%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 TLPDL YDY ALEP ISG+I +LHH + H YV N A+ +L +A D + + + + F+ GGH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCS2 (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.757e-43 Identity = 88/188 (46.81%), Postives = 116/188 (61.70%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 TLPDL YDY ALEP ISG+I +LHH + H YV N A+ +L +A D + + + + F+ GGH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCPA (Superoxide dismutase [Mn] OS=Mycobacterium paratuberculosis GN=sodA PE=1 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.757e-43 Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 TLPDL +DY+ALEP ISG+I ++HH + H YV N A+ +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 5 TLPDLDWDYAALEPHISGQINEIHHTKHHATYVKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_MYCAV (Superoxide dismutase [Mn] OS=Mycobacterium avium GN=sodA PE=3 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 7.519e-43 Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 TLPDL +DY+ALEP ISG+I ++HH + H YV N A+ +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 5 TLPDLDWDYAALEPHISGQINEIHHTKHHATYVKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |