CN181924

Overview
NameCN181924
Unique NameCN181924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7556 contig Csv1_Contig7556:86..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: TMX3_MOUSE (Protein disulfide-isomerase TMX3 OS=Mus musculus GN=Tmx3 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  110 LVEFYAPWCGHCKKLAPEYEKLGASFKKAKS-VLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVK 385
            LV+FYAPWCGHCKKL P + ++G   K   S V +GK+D   + S+ S++GV+GYPTI+   KG L    Y GPR+ + + E+ +   G  ++
Sbjct:   48 LVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLL-KGDL-AYNYRGPRTKDDIIEFAHRVSGALIR 138          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: TMX3_PONAB (Protein disulfide-isomerase TMX3 OS=Pongo abelii GN=TMX3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 2
Query:   71 DNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKS-VLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVK 385
            D   KE   D   LV+FYAPWCGHCKKL P + ++G   K   S V +GK+D   + S+ S++GV+GYPTI+   KG L    + GPR+ + + E+ +   G  ++
Sbjct:   32 DESFKENRNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLL-KGDL-AYNHRGPRTKDDIIEFAHRVSGALIR 135          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: ERP44_BOVIN (Endoplasmic reticulum resident protein ERp44 OS=Bos taurus GN=ERP44 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.754e-14
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 2
Query:   17 LTLFFVSALADDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKK----AKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNE 367
            L  +  + +  +++ L  +N +  +     ALV FYA WC   + L P +E+     K+    A  V+  +VDCD+H  +  +Y +  YPT++ F  G +  ++Y G RS +ALA+Y+  +
Sbjct:   19 LVTWVFTPVTAEIISLDTENIDDILNNADVALVNFYADWCRFSQMLHPIFEEASNVIKEEYPNANQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQ 139          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: ERP44_HUMAN (Endoplasmic reticulum resident protein ERp44 OS=Homo sapiens GN=ERP44 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 2
Query:   17 LTLFFVSALADDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEK----LGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLVEFY 481
            L  +  + +  ++  L  +N ++ +     ALV FYA WC   + L P +E+    +   F     V+  +VDCD+H  +  +Y +  YPT++ F  G +  ++Y G RS +ALA+Y+  +           S+ +    D  +   LD+SK  ++ ++
Sbjct:   19 LVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQ----------KSDPIQEIRDLAEITTLDRSKRNIIGYF 167          

HSP 2 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:  395 VPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEK----VAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGG 682
            V + +  L  +N DEI L+ +   LV FYA WC   + L P +E+    +   F  E+ VV A +D D++ D+A++Y +S +PTLK F  G     EY G
Sbjct:   27 VTTEITSLDTENIDEI-LNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRG 125          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: ERP44_MOUSE (Endoplasmic reticulum resident protein ERp44 OS=Mus musculus GN=Erp44 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 41/149 (27.52%), Postives = 73/149 (48.99%), Query Frame = 2
Query:   50 DVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKA----KSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIV-LDKSKDVLVEFY 481
            ++  L  +N ++ +     ALV FYA WC   + L P +E+     K+       V+  +VDCD+H  +  +Y +  YPT++ F  G +  ++Y G RS +ALA+Y+  +    V               + DE+  LD+SK  ++ ++
Sbjct:   30 EIASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSNPVH-----------EIQSLDEVTNLDRSKRNIIGYF 167          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 45/137 (32.85%), Postives = 73/137 (53.28%), Query Frame = 2
Query:   62 LTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLV 472
            LT++NF + + +    LV+FY   CG+C+ LAPE+EK  A+ +   + L+G+VDC     L + + ++GYPTI  F  G  E + Y G R+ + + +Y+      NV  A  P       A N +E+   K +  +V
Sbjct:   24 LTKENFNETIAKSEIFLVKFYVDTCGYCQMLAPEWEK--AANETIDNALMGEVDCHSQPELAANFSIRGYPTIILFRNGK-EAEHYGGARTKDDIIKYIK----ANVGPAVTP-------ASNAEEVTRAKEEHDVV 146          

HSP 2 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 2
Query:  446 LDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNK 661
            L   KD+L+ F+APWCGHCKN APT++K+A  F    D++VA LDA      +  + V+ FPT+ F P G K
Sbjct:  363 LTSGKDMLILFFAPWCGHCKNFAPTFDKIAKEFD-ATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGGK 433          

HSP 3 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = 2
Query:   47 DDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNV 409
            D    +     +K +   +  L+ F+APWCGHCK  AP ++K+   F  A  +++ ++D   +    S + V  +PT+ + P G  +P  +EG RS E + E+V     T  K++  P+NV
Sbjct:  349 DGKTTIVAKTMQKHLTSGKDMLILFFAPWCGHCKNFAPTFDKIAKEF-DATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGG-KPVVFEGERSFENVYEFVRKH-VTTFKVSEKPANV 466          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: TXND_THEPA (Thioredoxin domain-containing protein OS=Theileria parva GN=TP02_0602 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 2
Query:   53 VVVLTEDNFEKEVGQDRGA-----LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYE-GPRSAEALAEY 355
            +V+L E NFEK      GA      V+FYAPWC HC+K+AP +E L  + K    V +  VD   + +L  ++ ++GYPT+  F KG +   +YE G R+ E L+E+
Sbjct:   32 LVLLNEKNFEKLTQASTGATTGTWFVKFYAPWCSHCRKMAPAWESLAKALK--GQVNVADVDVTRNLNLGKRFQIRGYPTLLLFHKGKM--YQYEGGERTVEKLSEF 134          

HSP 2 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  374 TNVKIAAVPSN-VVVLTADNFDEIVLDKSKDV----LVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKG 655
            TNVK+     N +V+L   NF+++    +        V+FYAPWC HC+ +AP +E +A A  L+  V VA++D  +  +L +++ + G+PTL  F KG
Sbjct:   20 TNVKLDREDQNHLVLLNEKNFEKLTQASTGATTGTWFVKFYAPWCSHCRKMAPAWESLAKA--LKGQVNVADVDVTRNLNLGKRFQIRGYPTLLLFHKG 116          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: MPD1_YEAST (Protein disulfide-isomerase MPD1 OS=Saccharomyces cerevisiae GN=MPD1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 2
Query:  416 LTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFF 646
            LT  +FD+ + + +   LVEFYAPWCGHCK L+ T+ K A        V   N D +K K L  KY V+GFPTL  F
Sbjct:   34 LTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 110          

HSP 2 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 56/213 (26.29%), Postives = 86/213 (40.38%), Query Frame = 2
Query:   62 LTEDNFEKEV-GQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKK----------------YEGPRSAEALAEYVNNEGGTNV-KIAAVPSNVVVLTADNFDEIVL----DKSKDVLVEFYAPWCG-------------HCKNLAPTYEKVAAAFTLEDDVVVANLDADKYK 595
            LT  +F+K +   +  +LVEFYAPWCGHCKKL+  + K          V     D +++K+LC+KY V G+PT+  F    ++  K                Y G R+   + ++  +   + V K   + +   +L       +VL    DK   V       W G                ++ PTYEK    F     V+     +DK K
Sbjct:   34 LTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSK 246          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: PDI_ALTAL (Protein disulfide-isomerase (Fragment) OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  278 IQWFPKGSLEPKKYEGPRSAEALAEYVNN----EGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVA---AAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFP 649
            IQ   K    P   E   + + + ++V++    +   ++K   +P +    V V+ A N+ ++V+D  KDVLVEFYAPWCGHCK LAP YE++    A+  L   V +A +DA    D+ ++  + GF     FP
Sbjct:  187 IQRTEKNEKFPTNQEAKITEKEIGKFVDDFLAGKIDPSIKSEPIPESNDGPVTVVVAHNYKDVVIDNDKDVLVEFYAPWCGHCKALAPKYEELGQLYASDELSKLVTIAKVDA-TLNDVPDE--IQGFLPSSLFP 318          
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 45/145 (31.03%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  251 KYGVQGYPTIQWFPKGSLE-PKKYEGPRSAEALAEYVNNEGGTNVKIAAVP----SNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAF----TLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGN 658
            KYG+   P  ++     LE P+  +     + + +Y        VK   +P    SNV  +     D+IV D  KDVLV++YA WC H K  AP YE++A       ++ D +++A +D+     L+  + V+G+PT+  +P GN
Sbjct:  323 KYGLPQLPEEEY---AKLEKPQPLDRDMIVQLVKDYREGTAKPIVKSEEIPKEQKSNVYKIVGKTHDDIVHDDDKDVLVKYYATWCIHSKRFAPIYEEIANVLASDESVRDKILIAEVDSGANDILS--FPVTGYPTIALYPAGN 462          
The following BLAST results are available for this feature:
BLAST of CN181924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
TMX3_MOUSE1.846e-1543.01Protein disulfide-isomerase TMX3 OS=Mus musculus G... [more]
TMX3_PONAB3.148e-1540.57Protein disulfide-isomerase TMX3 OS=Pongo abelii G... [more]
ERP44_BOVIN7.754e-1429.75Endoplasmic reticulum resident protein ERp44 OS=Bo... [more]
ERP44_HUMAN1.013e-1325.79Endoplasmic reticulum resident protein ERp44 OS=Ho... [more]
ERP44_MOUSE1.727e-1327.52Endoplasmic reticulum resident protein ERp44 OS=Mu... [more]
BS2_TRYBB2.256e-1332.85Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]
TXND_THEPA5.026e-1339.25Thioredoxin domain-containing protein OS=Theileria... [more]
MPD1_YEAST5.026e-1346.75Protein disulfide-isomerase MPD1 OS=Saccharomyces ... [more]
PDI_ALTAL1.910e-1234.07Protein disulfide-isomerase (Fragment) OS=Alternar... [more]
EUG1_YEAST5.557e-1231.03Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181924 ID=CN181924; Name=CN181924; organism=Citrus sinensis; type=EST; length=684bp
GCTAGCTCTAGGCACTTTAACCTTGTTCTTCGTATCAGCTCTAGCGGACG
ATGTCGTTGTGCTAACAGAAGACAACTTCGAGAAGGAGGTTGGTCAGGAC
AGGGGAGCTCTTGTTGAGTTTTACGCTCCTTGGTGTGGCCACTGTAAAAA
GCTTGCTCCAGAGTATGAGAAACTTGGTGCAAGCTTTAAGAAAGCAAAGT
CTGTCTTGATTGGAAAGGTGGACTGTGACGAGCATAAGAGCTTATGCAGC
AAATATGGTGTTCAAGGATACCCAACAATTCAATGGTTTCCTAAAGGTTC
TTTGGAACCCAAAAAGTATGAAGGGCCACGATCTGCTGAAGCCCTTGCTG
AGTATGTGAATAATGAAGGAGGAACCAATGTGAAGATAGCTGCAGTCCCA
TCCAATGTGGTGGTACTAACAGCTGATAATTTTGATGAGATAGTTTTGGA
CAAAAGCAAAGATGTTTTGGTTGAATTTTATGCACCATGGTGTGGCCATT
GCAAAAACCTTGCGCCTACATATGAAAAGGTGGCAGCCGCATTTACATTG
GAAGATGATGTAGTTGTTGCTAATTTGGATGCTGACAAATACAAGGATCT
GGCTGAGAAGTATGGAGTTAGTGGATTTCCTACATTGAAGTTCTTTCCAA
AAGGCAACAAAGATGGTGAGGAATATGGGGGTGG
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