CN181924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 407 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++ LT D+FD VL +LV+F+A WCG CK +AP +++A + + + VA L+ D+ A KYG+ G PTL F G + G Sbjct: 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 407 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++ LT D+FD VL +LV+F+A WCG CK +AP +++A + + + VA L+ D+ A KYG+ G PTL F G + G Sbjct: 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 407 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++ LT D+FD VL +LV+F+A WCG CK +AP +++A + + + VA L+ D+ A KYG+ G PTL F G + G Sbjct: 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_PSEAE (Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 404 NVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++V +T +F++ VL VLV+++A WCG CK +AP ++VA + + + V L+ D+ +D KYGV G PTL F GN + + G Sbjct: 4 HIVNVTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDY--QGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_ECOLI (Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 407 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++ LT D+FD VL +LV+F+A WCG CK +AP +++A + + + VA L+ D+ A KYG+ G PTL F G + G Sbjct: 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 407 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++ LT D+FD VL +LV+F+A WCG CK +AP +++A + + + VA L+ D+ A KYG+ G PTL F G + G Sbjct: 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 407 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYG 679 ++ LT D+FD VL +LV+F+A WCG CK +AP +++A + + + VA L+ D+ A KYG+ G PTL F G + G Sbjct: 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11 Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 392 AVPSNVVVLTA-------DNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNK 661 A P VV+ A D F +VL+ S VLV+F+APWCG C+ +AP +++A + +D + L+ D+ ++A +YG+ PT+ F G K Sbjct: 24 AAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEY--KDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKK 118
BLAST of CN181924 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 416 LTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKG 655 +T D+F++ VL K VLV+F+A WCG C+ +AP+ E +AA + D + + L+ D+ A KYGV PTL + G Sbjct: 8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEY--GDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGG 85 The following BLAST results are available for this feature:
BLAST of CN181924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181924 ID=CN181924; Name=CN181924; organism=Citrus sinensis; type=EST; length=684bpback to top |