CN181923

Overview
NameCN181923
Unique NameCN181923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.644e-39
Identity = 76/116 (65.52%), Postives = 97/116 (83.62%), Query Frame = -2
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  392 SKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.801e-38
Identity = 75/116 (64.66%), Postives = 95/116 (81.90%), Query Frame = -2
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  392 SKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.658e-38
Identity = 75/116 (64.66%), Postives = 94/116 (81.03%), Query Frame = -2
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + +    SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  392 SKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.628e-36
Identity = 78/118 (66.10%), Postives = 95/118 (80.51%), Query Frame = -2
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-AEGE-GKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEI MGG NT+V+HNTCEDSLLA P++LDLV+L ELSTRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  396 SKRAMDEYTSEIMMGGHNTLVIHNTCEDSLLATPLILDLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 6.473e-27
Identity = 61/119 (51.26%), Postives = 77/119 (64.71%), Query Frame = -2
Query:  273 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-----AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 614
            SK AMDEY SE+ +GG N I +HN CEDSLLA P+++DL+++ E  TR+  K      E  GKF +F+PV T LSY  KAPL  PG   VN L+KQR  LEN LR  +GL  +N +  E
Sbjct:  411 SKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFE 529          
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = -2
Query:  273 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 614
            SK AMDEY SE+ +GG N I +HN CEDSLLA P+++DLV+  E +TR+Q+K  G+  +   +PVA++LSY  KAPL  PG   +N L+KQR  L N+L   VGL  +N +  E
Sbjct:  403 SKVAMDEYYSELMLGGHNKISIHNVCEDSLLATPLIIDLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGLPIDNELRFE 516          
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.033e-24
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = -2
Query:  300 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-------AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 614
            SK AMDEY SE+ +GG N I +HN CEDSLLA P+++DL+++ E  +R+  +       AE +G F +F+PV + LSY  KAPL  PG   +N L+KQR  LEN LR  +GL
Sbjct:  414 SKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLIVMTEFCSRVTYRNVDGQDGAEAKGDFENFYPVLSFLSYWLKAPLTKPGYQPINGLNKQRTALENFLRLLIGL 525          
The following BLAST results are available for this feature:
BLAST of CN181923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN5.644e-3965.52Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MOUSE2.801e-3864.66Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_BOVIN3.658e-3864.66Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_DROME7.628e-3666.10Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_YEAST6.473e-2751.26Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANAL1.104e-2650.00Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_CANGA1.033e-2449.11Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181923 ID=CN181923; Name=CN181923; organism=Citrus sinensis; type=EST; length=615bp
GAGGAGTTATTTATGAACTTCCATATATTATCTACTTGCAATACAAGAGA
TTTCATGCTCCGAAATGAGCTACAAAGGCAATGGGCTACACTCCAGCACC
TTCATTAAAAAAATAAAAGAGCAAACATACAGGACACACTAATATTAACC
ACAATTTCATGACACAAGACATTACAATCAGTAATTAAATGGACCACCAC
AGCTTTGATTGGTGACAGAGAAAGGGAAAACCGGTTCTTCCACTTTTCTC
CCCTGCAAGTTCTTCACTTGTATTCCAAAATCATGTTGTTCTCAGGAGCC
AAGCCAACGCAAGCCCTCAGAATGTTCTCAAGCATTGCACGCTGCTTCGA
CAGCGCATTCACCACTGGTGTGCCTGGAGGGACCAGAGGAGCCTTGGTGA
GGTAGCTGAGAATTGTAGCCACAGGGTGGAAAGAGTGGAATTTGCCCTCT
CCTTCAGCTTTGAGCTGGATCCTGGTGCTGAGTTCAGCCAGCAGAACCAA
ATCTAGAACGATTGGAGCAGCCAAAAGAGAGTCCTCACACGTGTTGTGCA
GCACAATGGTGTTCTTGCCACCCATGAAAATTTCTGATGTGTACTCATCC
ATGGCTCTCTTGCTA
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