CN181917

Overview
NameCN181917
Unique NameCN181917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CHLTB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGV-SAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM 631
            V+ I  I+++LPHR+PFLLVD+++ Y+    S VA KNVTIN+ FF GHFP  PIMPGVL++EA+AQ  G+++
Sbjct:    6 VLGIQDIQNLLPHRYPFLLVDKILSYDLNTRSVVAQKNVTINEPFFAGHFPGAPIMPGVLILEALAQAAGVLL 78          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CHLTA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGV-SAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM 631
            V+ I  I+++LPHR+PFLLVD+++ Y+    S VA KNVTIN+ FF GHFP  PIMPGVL++EA+AQ  G+++
Sbjct:    6 VLGIQDIQNLLPHRYPFLLVDKILSYDLNTRSVVAQKNVTINEPFFAGHFPGAPIMPGVLILEALAQAAGVLL 78          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CHLT2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGV-SAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM 631
            V+ I  I+++LPHR+PFLLVD+++ Y+    S VA KNVTIN+ FF GHFP  PIMPGVL++EA+AQ  G+++
Sbjct:    6 VLGIQDIQNLLPHRYPFLLVDKILSYDLNTRSVVAQKNVTINEPFFAGHFPGAPIMPGVLILEALAQAAGVLL 78          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ2_LACLA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 2 OS=Lactococcus lactis subsp. lactis GN=fabZ2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML-QPEVGGSRENFFFAGI 682
            +++ +I + LPHR+PFLLVDRVI+        AIKNVTIN+ FF GHFP+ P+MPGVL++EA+AQ  G++ L +PE  G  +  F+AG+
Sbjct:    6 INVTEIMEALPHRYPFLLVDRVIDIAED-EITAIKNVTINEEFFQGHFPQYPVMPGVLIMEALAQAAGVLELSKPENKG--KLVFYAGM 91          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_XYLFT ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSA-VAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628
            +DI +I+ +LPHR+PFLLVDR++E +      VA KNV+IN+ FF GHFPE P+MPGVL++EA+AQ GG++
Sbjct:   16 IDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALAQAGGVM 86          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_XYLFM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Xylella fastidiosa (strain M12) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSA-VAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628
            +DI +I+ +LPHR+PFLLVDR++E +      VA KNV+IN+ FF GHFPE P+MPGVL++EA+AQ GG++
Sbjct:   16 IDIIKIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALAQAGGVM 86          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_XYLFA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Xylella fastidiosa GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSA-VAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628
            +DI +I+ +LPHR+PFLLVDR++E +      VA KNV+IN+ FF GHFPE P+MPGVL++EA+AQ GG++
Sbjct:   16 IDIIKIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALAQAGGVM 86          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_XYLF2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Xylella fastidiosa (strain M23) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSA-VAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628
            +DI +I+ +LPHR+PFLLVDR++E +      VA KNV+IN+ FF GHFPE P+MPGVL++EA+AQ GG++
Sbjct:   16 IDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALAQAGGVM 86          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_VEREI ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Verminephrobacter eiseniae (strain EF01-2) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628
            MDI+ I   LPHR+PFLLVD+VIE        AIKNVT N+ +F GHFP RP+MPGVL++EA+AQ  GL+
Sbjct:    1 MDIHAIVKQLPHRYPFLLVDKVIELERNTRIKAIKNVTCNEPYFMGHFPGRPVMPGVLILEALAQAAGLL 70          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_THICR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thiomicrospira crunogena (strain XCL-2) GN=fabZ PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643
            ++++ +I + LPHR+PFLLVDRV E+  G S  A KNVT N+  F GHFP+ PIMPGV+++EAMAQ  G++  + +
Sbjct:    1 MLNVKEIFEYLPHRYPFLLVDRVTEFKSGESLKAYKNVTYNEPQFTGHFPDNPIMPGVMIIEAMAQCTGILAFKTQ 76          
The following BLAST results are available for this feature:
BLAST of CN181917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_CHLTB3.363e-1756.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CHLTA3.363e-1756.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CHLT23.363e-1756.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ2_LACLA3.363e-1751.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_XYLFT4.393e-1757.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_XYLFM4.393e-1757.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_XYLFA4.393e-1757.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_XYLF24.393e-1757.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_VEREI4.393e-1760.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THICR4.393e-1751.32(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K19_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181917 ID=CN181917; Name=CN181917; organism=Citrus sinensis; type=EST; length=682bp
GAGGCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAAACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATT
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