CN181917

Overview
NameCN181917
Unique NameCN181917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:51..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRATT ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. tularensis GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRATO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRATN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. novicida (strain U112) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRATM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRATH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRATF ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_FRAT1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYN-PGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV----------MLQPEVGGSRENFFFAGI 682
            +D+  IR ILPHR+PF L+D++++++    + VA KNVTIN++FF GHFP+ P+MPGVL+VEAMAQ   ++           +  + GG R  F  AGI
Sbjct:   11 IDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGI 109          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CAMFF ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=fabZ PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628
            ++D+ +I+ ILPHR+PFLL+DRV E   G S  A KN+TI +  F GHFP  PI PGV+++E MAQ GG++
Sbjct:    1 MIDVVEIQKILPHRYPFLLIDRVCELETGKSVYAYKNITIAEQIFEGHFPGHPIYPGVMIIEGMAQAGGIL 71          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_BRASB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVG 649
            +DIN+I   LPHR+PFLL+DRV       S + +KNV+I +  F GHFPERP+ PGVLM+E MAQ  G++ ++   G
Sbjct:   11 VDINEILKTLPHRYPFLLIDRVKNIRADYSGIGVKNVSIGEPCFQGHFPERPVYPGVLMIEGMAQTAGVIGIKSVEG 87          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_TOLAT ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAV---AIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML----QPEVGGSRENFFFAGI 682
            +DI  I  +LPHR+PFL+VDRV+ Y          AIKNV+ N+ FF GHFPERP+ PGVL++EAMAQ  G++      +P  G   E ++FA I
Sbjct:    8 LDIQDILQLLPHRYPFLMVDRVVHYEMSEERKVLRAIKNVSFNEPFFQGHFPERPVFPGVLILEAMAQATGILAFRMVGKPNPG---ELYYFASI 99          
The following BLAST results are available for this feature:
BLAST of CN181917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_FRATT5.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRATO5.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRATN5.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRATM5.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRATH5.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRATF5.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_FRAT15.737e-1745.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CAMFF5.737e-1753.52(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BRASB5.737e-1750.65(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_TOLAT7.493e-1748.42(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K19_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181917 ID=CN181917; Name=CN181917; organism=Citrus sinensis; type=EST; length=682bp
GAGGCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAAACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATT
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