CN181917

Overview
NameCN181917
Unique NameCN181917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:51..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_ANATD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 2
Query:  422 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGI 682
            +I++I +I+PHR+PFLLVDR+IE   G  A  IKNVTIN+ FF GHFP  P+MPGVL+VEAMAQVG + ML  E    +   FFAGI
Sbjct:    3 NIDKILEIIPHRYPFLLVDRIIEVEEGKRAKGIKNVTINEPFFQGHFPSNPVMPGVLIVEAMAQVGAVAMLLKEEFKGKTP-FFAGI 88          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_METCA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Methylococcus capsulatus GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ--PEVGGSRENFFFAGI 682
            MDI  I++ LPHR+PFLLVDRV+E  PG   +AIKNVT N+ FF GHFP  PIMPGVL++EA+AQ  GL+  +  P+V G    ++  G+
Sbjct:    1 MDIQAIKEFLPHRYPFLLVDRVLECEPGKRLLAIKNVTYNEPFFQGHFPRVPIMPGVLIIEALAQTTGLLASETAPDVLGKGATYYLVGL 90          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_COXBU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGI 682
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGV 93          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_COXB2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain CbuG_Q212) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGI 682
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGV 93          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_COXB1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain CbuK_Q154) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 2
Query:  416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGI 682
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGV 93          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L  E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAILSKE 79          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L  E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAILSKE 79          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L  E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAILSKE 79          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L  E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAILSKE 79          
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L  E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAILSKE 79          
The following BLAST results are available for this feature:
BLAST of CN181917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_ANATD1.723e-2159.77(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_METCA2.251e-2154.44(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXBU2.251e-2151.61(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXB22.251e-2151.61(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXB12.251e-2151.61(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBM2.251e-2160.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBL2.251e-2160.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBJ2.251e-2160.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBH2.251e-2160.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB62.251e-2160.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K19_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181917 ID=CN181917; Name=CN181917; organism=Citrus sinensis; type=EST; length=682bp
GAGGCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAAACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATT
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