CN181917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_DESVH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=fabZ PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 413 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGI 682 +++DI QI +LPHR+PFLLVDRV+EY PG A KNVT+N+ FF GHFP P+MPGVL++EA+AQ GG LV+ + + F F GI Sbjct: 7 SILDIRQILGLLPHRYPFLLVDRVVEYVPGDYIKAYKNVTMNEPFFQGHFPGVPVMPGVLIMEALAQAGGILVVKSTDTAVEDKLFLFTGI 97
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_BACCN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=fabZ PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFF 670 +++I QI++I+PHR+PFLLVD+V+E G AV IKNV+ N+ FF GHFPE +MPGVL+VEA+AQVG + +L+ E R FF Sbjct: 1 MLNIEQIKEIIPHRYPFLLVDQVLEVEEGKRAVGIKNVSANEEFFNGHFPEYAVMPGVLIVEALAQVGAIAILKKEENRGRLAFF 85
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: LPXZ_BACTN (Bifunctional enzyme lpxC/fabZ OS=Bacteroides thetaiotaomicron GN=lpxC/fabZ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGI 682 VMD+N+IR++LPHR+PF LVD+VIE V IKN+T N+ FF GHFP+ P+MPGVL +EAMAQVGGL++L R + +F I Sbjct: 318 VMDVNRIRELLPHRYPFQLVDKVIEMGASY-IVGIKNITANEPFFQGHFPQEPVMPGVLQIEAMAQVGGLLVLNSVDEPERYSTYFMKI 405
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_SYNWW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=fabZ PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 2 Query: 419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE 643 ++ +I ILPHR+PFLLVDR+IE PG AV IKN+++N+ FFPGHFP P+MPGVLM+EAMAQVG +L E Sbjct: 6 LNTEEIMKILPHRYPFLLVDRIIELLPGERAVGIKNLSVNEPFFPGHFPGHPVMPGVLMIEAMAQVGACAILCDE 80
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_SHEON ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella oneidensis GN=fabZ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 419 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV---MLQPEVGGSRENFFFAGI 682 MDI +I LPHR+PFLL+DRV+++ PG S AIKNVTIN+ FF GHFP +P+MPGVL++EAMAQ GL+ + +V ++FAGI Sbjct: 8 MDITEILKYLPHRYPFLLIDRVLDFTPGESLHAIKNVTINEPFFQGHFPIQPVMPGVLILEAMAQATGLLAFKTMSDDVPPPGVLYYFAGI 98
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_PROMS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain AS9601) GN=fabZ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 434 IRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGI 682 I +LPHR+PF LVD+VIE PG AVA+KNVTIN+ F GHFPERP+MPGVL+VE+MAQVGG+++ Q + + F FAGI Sbjct: 17 ILGLLPHRYPFALVDKVIENIPGERAVAVKNVTINEPQFQGHFPERPLMPGVLIVESMAQVGGIIVTQMQ-NLPKGLFVFAGI 98
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_MARMS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Marinomonas sp. (strain MWYL1) GN=fabZ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 2 Query: 416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV 628 +MD+N+IR LPHR+PFLLVDR++E N S +A KNVTIN+ FF GHFP P+MPGVL++EAMAQ G++ Sbjct: 1 MMDVNEIRQYLPHRYPFLLVDRIVEINLNDSIIAYKNVTINEPFFNGHFPNHPVMPGVLIIEAMAQAAGVL 71
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_BACWK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus weihenstephanensis (strain KBAB4) GN=fabZ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 2 Query: 416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGI 682 +++I QI++I+PHR+PFLLVD+++E + G AV IKNV+ N+ FF GHFP+ +MPGVL+VEA+AQVG + +L+ E R FFAGI Sbjct: 1 MLNIEQIKEIIPHRYPFLLVDKILEVDEGKRAVGIKNVSANEEFFNGHFPDYAVMPGVLIVEALAQVGAVAVLKKEENRGR-LAFFAGI 88
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_BACSU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus subtilis GN=fabZ PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGI 682 ++D QI++I+PHR+PFLLVDR+ E G A KNVT N+ FF GHFP+ P+MPGVL+VEA+AQVG + ML E R FFAGI Sbjct: 1 MLDTQQIKEIIPHRYPFLLVDRITEVEEGKRAKGYKNVTANEEFFNGHFPQYPVMPGVLIVEALAQVGAVAMLIKEENRGR-LAFFAGI 88
BLAST of CN181917 vs. ExPASy Swiss-Prot
Match: FABZ_BACHK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus thuringiensis subsp. konkukian GN=fabZ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 2 Query: 416 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGI 682 +++I QI++I+PHR+PFLLVD+++E + G AV IKNV+ N+ FF GHFP+ +MPGVL+VEA+AQVG + +L+ E R FFAGI Sbjct: 1 MLNIEQIKEIIPHRYPFLLVDKILEVDEGKRAVGIKNVSANEEFFNGHFPDYAVMPGVLIVEALAQVGAVAVLKKEENRGR-LAFFAGI 88 The following BLAST results are available for this feature:
BLAST of CN181917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181917 ID=CN181917; Name=CN181917; organism=Citrus sinensis; type=EST; length=682bpback to top |