CN181900

Overview
NameCN181900
Unique NameCN181900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6085 contig Csv1_Contig6085:22..671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16
Identity = 58/198 (29.29%), Postives = 96/198 (48.48%), Query Frame = 3
Query:   12 AIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAK--VVISKLIEQLTFNISLKLIAGK 593
            A   L+SLL +     ++ +  + +++     P G W  PL+G L  L    P    L  LA KYGP+  LR+G+   ++VS     ++     D + A+R  ++  +   YDN     APY  YWR +RK+ T ELLS+  +  L  VR  E  T ++++ +  S +     K  V +++L+   T  I+ K   G+
Sbjct:   32 ATLTLVSLLTLPILLALLTRKSSSKKRR----PPGPWNLPLVGGLLHLLRSHPQVA-LRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQ 224          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16
Identity = 59/200 (29.50%), Postives = 99/200 (49.50%), Query Frame = 3
Query:   12 AIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 611
            A+  L+S LI Y F+R      ++  KN  P P    P+IGH+ +L     + +    L+ +YGP++SL  G    ++ S     K    TN+     R +  A K + Y++++ A APY  YWR I+K++  ELL S  +   +H+R  E    ++    L S  A     V I++ + +LT N+   ++ G+   A+D
Sbjct:    7 AVSVLVSALICYFFFR---PYFHRYGKNLPPSPFFRLPIIGHMHMLGPL--LHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYESSL-AFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLR----LLSNRARAFEAVNITEELLKLTNNVISIMMVGEAEEARD 196          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16
Identity = 59/207 (28.50%), Postives = 99/207 (47.83%), Query Frame = 3
Query:   18 FELLSLLIVYCFWRIIAKSINKREKNTAPEPSGA-WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEA 635
            + LL LL+++ F  I       + +N    PS    P+IG+L  L G  P  + L  L+ KYGP+  L LG  P+++ S  +  +D   T+D + ATR K      + Y +     +P+ +YW  +R I    LLS+ R++  + VR  E    I+ +   C  +  N     + + +  LT NI+ ++  G+ +   D  E G +A
Sbjct:    8 YSLLILLLLFIFLLIHHCFTTSKTQNMFLPPSPRKLPIIGNLHQL-GSHPH-RSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVIN-----LGEHLCFLTNNITSRVALGRTY---DERESGIDA 204          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.295e-15
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 3
Query:   24 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 599
            L++LL    F   + K        T P      P++G+L  L G  P  + L +L+ +YGP+  L  G  P+L+ S  E  ++     D   + R  +   + + YDN   A APY +YWR IR I   +LLS+ R++  + VR  E    ++ +  L  +     A V ++ L+  LT ++  ++  GK++
Sbjct:    2 LIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQL-GTFPH-RSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQL--QKTTPTAAVNLTDLLTCLTNDVFCRIALGKKY 189          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15
Identity = 63/201 (31.34%), Postives = 100/201 (49.75%), Query Frame = 3
Query:   24 LLSLLIVYCFWRIIAKSINKR--EKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 620
            ++ L++ Y    +I K   K   ++N  P P    PLIGHL LL G+ P    L ++A +YGP+  ++LG+   +++S  E  K+     D   A R + +  K M YDN     +PYS +WR +RKI  +ELLS+  +     +R  EV   +  L S    +A     V +++ I  LT +I  +   G     +D+EE
Sbjct:    9 IIILVVTYTISLLIIKQWRKPKPQENLPPGPPKL-PLIGHLHLLWGKLPQ-HALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRS----SAAAGEAVDLTERIATLTCSIICRAAFGS--VIRDHEE 201          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3
Query:   12 AIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL 488
            +IF  +S L +   W+   K +N  +  T   P G W  P IG +  L G  P  ++L  LA+KYGP+  L+LG+   ++V+  E+ K    T+D   A+R K++A   + Y+    A +PY  YWR +RKI   E+LS+  +     +R+ EV   I  +
Sbjct:    5 SIFLFISFLFLLRKWK---KYLNNSQ--TKKLPPGPWKLPFIGGMHHLAGGLPH-RVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSI 159          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15
Identity = 59/200 (29.50%), Postives = 103/200 (51.50%), Query Frame = 3
Query:   33 LLIVYCFWRIIAKSINKREKNTAPE----PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKI-VAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 608
            +LI  C   ++A  +    K TA +    P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+LIVS  ++  D   T+D + A R K  V  K +     + A APY +YWR ++ I    LL++  +   + +R  E+   I+ L  + CS    +P+ V +S+++  LT +I  ++  G+++S K
Sbjct:    4 ILITLCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTH--RSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDV-AFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSS---SPSPVNLSQILMTLTNDIICRVALGRKYSGK 197          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.208e-15
Identity = 56/194 (28.87%), Postives = 101/194 (52.06%), Query Frame = 3
Query:   39 IVYCFWRIIAKSINKREKNTA-------PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR-AKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 596
            +++CF  I++K+  K  +N+        P      P++G+   L+G      IL  LA KYGP+  L++G+   ++ S  +I ++ F T+D + A R + + + K + YD +   ++PY  YWR +RKI+  ELLS   ++  + +R  EV  FIK + S          ++ +SK I  L + I+ +   G++
Sbjct:    1 LLFCF--ILSKTTKKFGQNSQYSNHDELPPGPPQIPILGNAHQLSGGHTH-HILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSK------EGTRINLSKEISLLIYGITTRAAFGEK 185          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.208e-15
Identity = 55/196 (28.06%), Postives = 94/196 (47.96%), Query Frame = 3
Query:   27 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 614
            L  L++   + I  K ++  +    P P G  P+IG+L  L   + + +    L+  YGP+  L  G  P+++VS  E  ++   T+D    TR K+ A K   Y+      A Y   WR++RK+A  EL SS +L+  +++R  E +  +  L    S++A     V + K +   T +I  +L  G+ F   D+
Sbjct:    5 LYFLLLLPLFLIFFKKLSPSKGKLPPGPLGL-PIIGNLHQLG--KSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKL----SKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDF 193          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.884e-15
Identity = 55/206 (26.70%), Postives = 99/206 (48.06%), Query Frame = 3
Query:   12 AIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGS 629
            +IF    LL++     II    ++  K   P      P+IG+L  LNG    C +   L   +GP+  L+LG  P++++S  +  ++   T+D    +R + +A K + Y+      APY + WR +RK+A  EL S  +    +++R  E D  +K L    SE +   + V + K +  L+ +I  +L  G+     ++ ++ S
Sbjct:    2 SIFLCFLLLLLLLLVTIIFTRKSQSSKLKLPPGPPKLPIIGNLHYLNGLPHKCLL--NLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKL----SEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDS 201          
The following BLAST results are available for this feature:
BLAST of CN181900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
C99A2_ORYSJ9.912e-1629.29Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C93B1_GLYEC9.912e-1629.50Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71A4_SOLME9.912e-1628.50Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71A6_NEPRA1.295e-1528.13Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71DD_MENPI1.691e-1531.34Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71D7_SOLCH1.691e-1532.92Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71AK_ARATH1.691e-1529.50Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO2.208e-1528.87Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BM_ARATH2.208e-1528.06Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH2.884e-1526.70Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001K08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181900 ID=CN181900; Name=CN181900; organism=Citrus sinensis; type=EST; length=650bp
GAGGCACCCCAGCAATTTTTGAGCTCTTATCTCTGCTAATTGTCTATTGT
TTTTGGAGAATCATAGCAAAATCTATAAACAAAAGAGAGAAAAATACTGC
CCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCATTTGCCTCTGCTAA
ATGGCCAAGAACCAATTTGCAAAATACTTGGAGCATTGGCCGATAAATAT
GGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCCATATTGATTGTGAG
CGGTTGGGAAATTGTGAAGGATTGCTTCACTACCAATGACAGAATTCTGG
CTACAAGGGCAAAAATTGTAGCAGGCAAGTATATGGGTTATGACAACGCC
ATTTTTGCACTTGCTCCCTACAGTCAGTACTGGCGTGATATTCGCAAAAT
AGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGAATTGCTGAAGCACG
TTCGCTACTCTGAAGTTGACACTTTCATCAAAGATTTGTACTCACTTTGC
TCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATCAGCAAGTTAATCGA
GCAGTTAACTTTCAATATAAGCCTGAAACTGATAGCTGGGAAGCGATTTT
CAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTTGGCGTATCAACAGA
back to top