CN181900

Overview
NameCN181900
Unique NameCN181900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13
Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 3
Query:   15 IFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVV-ISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWR 641
            I  +++L  V  F+ +  K   KR K   P PS   P+IG+L  L    P  +     A KYGPI S R+G   ++++S  E+ K+   T D   A R      +++ Y     AL  Y+ Y+R+IRK+    L S  R+   KHVR  E    +  +       A + ++VV IS+L+   T ++  +   GK+     Y E G E  R
Sbjct:    5 IIGVVALAAVLLFF-LYQKPKTKRYK-LPPGPSPL-PVIGNLLQLQKLNPQ-RFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKI-----NKAADKSEVVDISELMLTFTNSVVCRQAFGKK-----YNEDGEEMKR 200          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13
Identity = 65/226 (28.76%), Postives = 101/226 (44.69%), Query Frame = 3
Query:    3 GTPAIFELLSLLIVYCFWRIIAK-----SINKREKNTA----PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRIN 647
            GT     LL +LI      + A+     S NKR++       P P G  P+IGHL L+  +  I   +  L  K+G   +  LR+G  P L VS          T D I A+R   +A + + Y  +  A  PY +Y R  RK+ TT +LS+ +++  +H R  EV   +  + +  +  A  PA V +S L+   T ++  + + G     +      SE   IN
Sbjct:   18 GTATHALLLGVLIFLVIRLVSARRTGTTSANKRKQQQRLPLPPWPPGKLPIIGHLHLIGAETHIS--IRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRA--AATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRNQGRNRLFSELTEIN 239          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13
Identity = 54/196 (27.55%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   27 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 602
            +SL +      ++ +   KR       P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E  ++   T+D   A R  +K V G   G  + +FA  PY +YWR ++ +    LL++  +E  + VR  EV+  I+ L    S ++       +S+L   L  +++ ++  G++ S
Sbjct:    7 ISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPH--RSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFA--PYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSEN----LSELFITLPSDVTSRVALGRKHS 194          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12
Identity = 52/191 (27.23%), Postives = 88/191 (46.07%), Query Frame = 3
Query:   27 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 599
            L  L++     I  K +   +    P P G  P+IG+L        + K L  ++ +YGP+  L  G  P++IVS  E  ++   T+D    +R K V      Y+      APY + WR++RKIA +EL S  +L+  +++R  E    ++ +     E     + V + K+I     +I  +L  G+ F
Sbjct:    5 LCFLLLLPLSLIFLKKLLPSKGKLPPGPKGL-PIIGNLHQFG--RFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETP--TSSVNLRKVIFTFAASIICRLSFGQNF 190          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12
Identity = 51/202 (25.25%), Postives = 104/202 (51.49%), Query Frame = 3
Query:   33 LLIVYCFWRIIAKSINKREKNTAPE-----PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRA--KIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 611
            ++I  C   I+A  + K+  N         P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+L+VS  ++  D   T+D  +A R   K+V   + G    +F+  PY +YWR I+ +    LL+  +++  + VR  E+   ++ +    S++    + + +S+L+  LT +++ ++  G+++S ++
Sbjct:    4 IIISLCLATILALLLLKQFLNRTYTAKVNLPPSPWRVPVIGNLHQLSLHPH--RSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFS--PYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDS----SPLNLSELLLTLTSDVTSRVSLGRKYSKEE 197          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12
Identity = 49/192 (25.52%), Postives = 92/192 (47.92%), Query Frame = 3
Query:   24 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 599
            LL L+ + C    +       +    P P G +P+IG+L  + G+ P  + L  L+ KYGP+  L LG+ P ++VS  +  +     +D    TR  +   + + Y+    A +PY  YW+++RK+   EL S+ ++  ++ ++  EV   I  +    +E+A     V ++    +LT ++  +   G  F
Sbjct:    6 LLPLIFLVCILLAVFNHKKHPKYRQFPCPPG-FPIIGNLHQI-GELPH-QTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSI----AESASQKNPVNLNNKCLELTVSVVCRTAFGVSF 190          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 3
Query:   60 IIAKSINKREKNTAPEPSGAW--PLIGHL-PLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLC-SENAFNPAKVVIS 539
            I+   + ++  +    P G W  PL+G L  LL  Q  +   L  LA KYGP+  LR G+   +++S     ++     D   A+R  ++  +   Y N     APY  YWR +RK+ T ELLS+  +  L  +R  E    ++++ +    +  F  A ++IS
Sbjct:   20 ILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVA--LRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLIS 181          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 58/204 (28.43%), Postives = 96/204 (47.06%), Query Frame = 3
Query:   15 IFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHL-PLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGK-YMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 620
            IF +L+ +I    + +  K+ +K+ K   P P G WP++G+L  +    +P  +I+  L  KYGPI++LR+G   ++I+S  ++V +      ++ ATR +    +     D      A Y   WR +RK      LSS RL+  + VR S +D  I+    + +E   N   V + K      F I L +  G     K  E+
Sbjct:   16 IFTILAFVISSIIYFLSKKAESKKLK-LPPGPPG-WPVVGNLLQVARSGKPFFQIMRELRQKYGPIFTLRMGTRTMIILSNADLVHEALILKGQVFATRPRENPTRTVFSCDKFTVNAAVYGPVWRSLRKNMVQNGLSSIRLKEFRAVRKSAMDKMIE---KIRAEADANEGVVWVLKNARFAVFCILLAMCFGVEMDEKTIEK 214          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 54/185 (29.19%), Postives = 94/185 (50.81%), Query Frame = 3
Query:   24 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGA--WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQ-YWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNI 569
            LL   I+ CF         +  +     P G    P+IG++ L+ G+ P  +    L+  YGP+ SL+LG    ++++  E  ++   T+D+IL+ R+   A + + + +A     P S   WR +R+++ T+LLS  R+E  K +R ++V    K+L S  SE++     V IS++    T NI
Sbjct:   11 LLFCFILSCFLIFTTTRSGRISRGATALPPGPPRLPIIGNIHLV-GKHPH-RSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKV----KELVSFISESSDREESVDISRVAFITTLNI 189          
BLAST of CN181900 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 55/204 (26.96%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   24 LLSLLIVYCFWRIIAKSINKREKNTAPE-PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQG 626
            L+SL +      +  K + KR   T P+ P   W  P+IG+L  L G  P  + L +L+ +YGP+  L  G+ P+L+VS  ++  D   T+D   A R K  A              PY + W+ ++ +    LL++  +   +++R  E+    + L     E + + + V +SKL+  LT +I  ++  G++++    EE+G
Sbjct:    5 LISLCLTTLLAFLFLKPLLKRITTTKPKLPPSPWRLPVIGNLHQL-GPNPH-RYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKL----EEASSSSSSVNLSKLLMTLTNDIICRITLGRKYN----EEEG 198          
The following BLAST results are available for this feature:
BLAST of CN181900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
C83A1_ARATH7.854e-1330.48Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE7.854e-1328.76Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71AD_ARATH7.854e-1327.55Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH1.026e-1227.23Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AE_ARATH1.026e-1225.25Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH1.340e-1225.52Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ1.750e-1228.66Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C77A2_SOLME1.750e-1228.43Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C76C1_ARATH1.750e-1229.19Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71AR_ARATH1.750e-1226.96Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181900 ID=CN181900; Name=CN181900; organism=Citrus sinensis; type=EST; length=650bp
GAGGCACCCCAGCAATTTTTGAGCTCTTATCTCTGCTAATTGTCTATTGT
TTTTGGAGAATCATAGCAAAATCTATAAACAAAAGAGAGAAAAATACTGC
CCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCATTTGCCTCTGCTAA
ATGGCCAAGAACCAATTTGCAAAATACTTGGAGCATTGGCCGATAAATAT
GGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCCATATTGATTGTGAG
CGGTTGGGAAATTGTGAAGGATTGCTTCACTACCAATGACAGAATTCTGG
CTACAAGGGCAAAAATTGTAGCAGGCAAGTATATGGGTTATGACAACGCC
ATTTTTGCACTTGCTCCCTACAGTCAGTACTGGCGTGATATTCGCAAAAT
AGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGAATTGCTGAAGCACG
TTCGCTACTCTGAAGTTGACACTTTCATCAAAGATTTGTACTCACTTTGC
TCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATCAGCAAGTTAATCGA
GCAGTTAACTTTCAATATAAGCCTGAAACTGATAGCTGGGAAGCGATTTT
CAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTTGGCGTATCAACAGA
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