CN181895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_STRPU (40S ribosomal protein S15a OS=Strongylocentrotus purpuratus GN=RPS15A PE=2 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29 Identity = 63/124 (50.81%), Postives = 88/124 (70.97%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DALR+I NAE+R K V ++P S V FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV E+E +T + LP+RQ+GYVV+TT G++DHEEA R++VGG++LG+F Sbjct: 6 VLADALRSICNAEKRCKRQVLIRPCSKVTVKFLMVMMKHGYIGEFEIVDDHRGGKIIVNLNGRLNKCGVISPRFDVPINEMEKWTSNLLPSRQFGYVVLTTSGGIMDHEEARRKHVGGKILGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_RAT (40S ribosomal protein S15a OS=Rattus norvegicus GN=Rps15a PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 58/124 (46.77%), Postives = 90/124 (72.58%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DAL++I NAE+RGK V ++P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV+ +++E + + LP+RQ+G++V+TT G++DHEEA R++ GG++LG+F Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_MOUSE (40S ribosomal protein S15a OS=Mus musculus GN=Rps15a PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 58/124 (46.77%), Postives = 90/124 (72.58%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DAL++I NAE+RGK V ++P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV+ +++E + + LP+RQ+G++V+TT G++DHEEA R++ GG++LG+F Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_HUMAN (40S ribosomal protein S15a OS=Homo sapiens GN=RPS15A PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 58/124 (46.77%), Postives = 90/124 (72.58%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DAL++I NAE+RGK V ++P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV+ +++E + + LP+RQ+G++V+TT G++DHEEA R++ GG++LG+F Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_BOVIN (40S ribosomal protein S15a OS=Bos taurus GN=RPS15A PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 58/124 (46.77%), Postives = 90/124 (72.58%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DAL++I NAE+RGK V ++P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV+ +++E + + LP+RQ+G++V+TT G++DHEEA R++ GG++LG+F Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_ICTPU (40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 59/124 (47.58%), Postives = 89/124 (71.77%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DAL+ I NAE+RGKA V ++P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV+ +++E + + LP+RQ+G++V+TT G++DHEEA R++ GG+ LG+F Sbjct: 6 VLADALKCINNAEKRGKAQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKSLGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS22_ASHGO (40S ribosomal protein S22 OS=Ashbya gossypii GN=RPS22A PE=3 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 59/125 (47.20%), Postives = 88/125 (70.40%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 +L DAL AI NAE+ GK V ++P S V+ FL +M+ GYI +F+ D HR GKI V+L GR+N C ++ R +VK ++E +T + LP RQ+GYV++TT G++DHEEA R++V G++LG+ + Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLTGRLNKCGVISPRFNVKINDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVAGKILGFVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS22B_YEAST (40S ribosomal protein S22-B OS=Saccharomyces cerevisiae GN=RPS22B PE=1 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 61/125 (48.80%), Postives = 88/125 (70.40%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 +L DAL AI NAE+ GK V L+P S V+ FL +M+ GYI +F+ D HR GKI V+L GR+N C ++ R +VK +IE +T + LP RQ+GYV++TT G++DHEEA R++V G++LG+ + Sbjct: 6 VLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_PONAB (40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 57/124 (45.97%), Postives = 89/124 (71.77%), Query Frame = -2 Query: 233 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 604 +L DAL++I NAE+RGK V ++P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV+ +++E + + P+RQ+G++V+TT G++DHEEA R++ GG++LG+F Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLFPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS15A_DICDI (40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 58/125 (46.40%), Postives = 89/125 (71.20%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 +LND L +IVNAER+GK V ++P S V+ FL +M + YI +F++ D HR GKI ++L+GR+N C ++ R DV EIE + + LP+RQ+G++V+TT G++DH EA R+ GG++LG+F+ Sbjct: 6 VLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGKIVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRHTGGKLLGFFY 130 The following BLAST results are available for this feature:
BLAST of CN181895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181895 ID=CN181895; Name=CN181895; organism=Citrus sinensis; type=EST; length=686bpback to top |