CN181895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METKA (30S ribosomal protein S8P OS=Methanopyrus kandleri GN=rps8p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19 Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L DA+ I N E G ++P S ++ L +M+ GYI F+ D R GK V+L+GR+NDC + R VK E E + LP R +G +++TTP+GV+ H EA R +GG++L Y + Sbjct: 7 LADAMATIKNNEMVGNKECVIEPASKLIGRVLKVMQEYGYIGSFEFIDDGRSGKFLVKLVGRINDCGVIKPRHPVKKDEWEYWEQRYLPARDFGLLIVTTPEGVMSHYEAKERGIGGRLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_THESM (30S ribosomal protein S8P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps8p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19 Identity = 46/124 (37.10%), Postives = 77/124 (62.10%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N+E+ GK+ V ++P S ++ L +M+ GYI +F+ D R G +V+LLG+VN + R VKA+E E + LP ++G +V++T GV+ H+EAL + +GG+++ Y + Sbjct: 7 LANALSHITNSEKVGKSEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLLGKVNKAGAIKPRFSVKAKEYEKWEKRFLPAFEFGILVVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 44/124 (35.48%), Postives = 76/124 (61.29%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+L+G++N + R VKARE E + LP ++G ++++T GV+ H+EA+ + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRLIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N ER GK V ++P S ++ L +M+ GYI +F+ + R G KVEL+G++N C + R VK E + LP R +G ++++T GV+ HEEA +R +GG++L Y + Sbjct: 7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 45/124 (36.29%), Postives = 76/124 (61.29%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N+ER GK V ++P S ++ L +M GYI +F+L D R G +V+L+G++N + R VKAR+ E + LP ++G ++++T GV+ H+EAL + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMLENGYIGEFELIDDGRAGIYRVQLIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METLZ (30S ribosomal protein S8P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps8p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = -2 Query: 236 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGY 595 DA+ AI NA GK V ++P S + L +M+ GYI F+ D R G+ ++ L G +N C +T R VK ++E + + LP + +G +++TT GV+ HE+A + VGG++LGY Sbjct: 9 DAMSAIKNAGDTGKLAVTVEPASRLFGDMLKVMQEYGYITGFEKIDDGRGGQFQIALSGGINKCGVITPRFSVKVEDLESWEIRYLPGKGFGIIILTTSKGVMSHEQARKLGVGGELLGY 128
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_HALWD (30S ribosomal protein S8P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps8p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = -2 Query: 230 GRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 613 G L +AL + NAE G + E+QP S V+ S L + RGYI F+ D + G+ +VEL G +N+C + R A E E + LP R +G +++TT GV+ H EA +GGQV+ Y + Sbjct: 3 GNDPLANALSGVDNAESVGHLSHEIQPASNVIGSVLEVFYDRGYINGFEFVDDGKAGRFEVELSGGINECGAVKPRYSAGADEFERWEKRYLPARDYGALIVTTSHGVMSHYEARETGIGGQVIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_THEPD (30S ribosomal protein S8P OS=Thermofilum pendens (strain Hrk 5) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I+N E RGK + P S ++ + L+ +K GYI DF+L D R GKI V LLGR+N + R VK E E + LP+R G ++++TP GV+ H EA + +GG +L Y + Sbjct: 6 LANALSTIMNNEVRGKKQCVIYPSSKLIVAVLDTLKRSGYIGDFELIDDGRGGKIVVNLLGRINKIGVIKPRYPVKKNEFEAWEREYLPSRDVGLLIVSTPKGVMTHREAKEKGLGGVLLAYVY 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PYRFU (30S ribosomal protein S8P OS=Pyrococcus furiosus GN=rps8p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+LLGR+N + R VK E E + LP ++G ++++T GV+ H+EA+ + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PICTO (30S ribosomal protein S8P OS=Picrophilus torridus GN=rps8p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 LND + I NA R GK+ V + P S ++ L +M+ YIK F++ + R GK +VEL +N+C + R VK IE Y LP + +G +++TT G++ H EA + +GG++L Y + Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129 The following BLAST results are available for this feature:
BLAST of CN181895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181895 ID=CN181895; Name=CN181895; organism=Citrus sinensis; type=EST; length=686bpback to top |