CN181895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_AERPE (30S ribosomal protein S8P OS=Aeropyrum pernix GN=rps8p PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHA---LPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +A+ AI NAE RGK + P S ++++ L I++ GYI F+ D R GK +V+LLGR+ND + R V RE+ H L +R G ++++TP GV+ H EAL+R +GG V+ Y + Sbjct: 7 LANAMAAIKNAEMRGKGEAIIMPSSKLIANVLRILEKEGYIGGFEYIDDGRWGKFRVKLLGRINDIGVVKPRTPVSYRELAKMPEHLRKYLASRDVGLLILSTPQGVMTHREALKRKIGGIVIAYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PYRHO (30S ribosomal protein S8P OS=Pyrococcus horikoshii GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 45/124 (36.29%), Postives = 74/124 (59.68%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N+ER GK + ++P S ++ L +M+ GYI +F+ D R G +V+LLGR+N + R VKA E E + LP ++G ++++T GV+ H+EA R +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKREIYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKATEYEKWEKRFLPAFEFGILIVSTSQGVMSHKEARDRGIGGRLIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PYRAB (30S ribosomal protein S8P OS=Pyrococcus abyssi GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 44/124 (35.48%), Postives = 75/124 (60.48%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+LLG++N + R VKAR+ E + LP ++G ++++T GV+ H+EA + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGKINKAGAIKPRFPVKARDYERWEKRFLPAFEFGILIVSTSQGVMSHKEAREKGIGGRLIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 46/127 (36.22%), Postives = 76/127 (59.84%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L++AL ++ N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+L+GR+N C +T R + RE + Y LP+++ G ++++TP GV+ H+EA R+ GG VLGY + Sbjct: 7 LSNALSSLYNNEMRRNKQAIIMPSSKLIVNVLRVMQKEGYVGEFEYIDDGRWGKILVQLMGRINKCGAITPRYSLTYREMISLPDYIRRYLPSKEIGVIIVSTPKGVMTHKEAARQRTGGIVLGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL + N ER GK ++P S ++ L +M+ GYI +F+ + R G KVEL+G++N C + R VK E E + LP R +G ++++T G++ H EA + +GG+++ Y + Sbjct: 7 LANALNHLTNCERVGKKVFYIKPASKLIGRVLKVMQDHGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRYAVKKHEFEKFEKRYLPARDFGLLIVSTSQGIMTHYEAKEKGIGGRLISYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L++A+ AI NAE G+ E++P S ++ + L +MK GYIK F+ + HR GK VEL G +NDC + R E E Y LP R +G ++++T GV+ ++A ++ +GG +L Y + Sbjct: 6 LSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_HYPBU (30S ribosomal protein S8P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREI---EGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +A+ AIVNAE R K V + P S ++++ L +M+ GYI +F+ D R GKI+V LLGR+N + R VK +++ + LP+R G ++I+T GV+ H EA++R +GG +L Y + Sbjct: 7 LANAMAAIVNAEMRAKPEVIIMPASKLIANVLRVMQREGYIGEFEYIDDGRWGKIRVRLLGRINKAGVIKPRFSVKYKDLIRMPDWLRKYLPSRDIGILIISTSQGVMSHREAIQRRIGGVLLAYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_UNCMA (30S ribosomal protein S8P OS=Uncultured methanogenic archaeon RC-I GN=rps8p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I NAE GK + P S ++ + L +M+ +GY+ +F+ D + G++KV+L+G++N C + R V E+E + LP R +G +++TT GV+ H +A + +GG++L Y + Sbjct: 7 LANALSVIKNAETTGKTDCVIDPASKIIGNVLKVMQDQGYVGEFEFVDNGKAGQLKVKLIGKINKCGVVKPRFAVGKTEMEKWEKRYLPARNFGTLILTTSKGVMSHYDAAKMGIGGEILAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METTL (30S ribosomal protein S8P OS=Methanococcus thermolithotrophicus GN=rps8p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 43/122 (35.25%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 236 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGY 601 L +AL I N E GK+ ++P S ++ LN+M+ GYI +F+ + R G KVEL+G++N C + R VK +E E + LP + +G ++++TP G++ H+EA + +GG+++ Y Sbjct: 7 LANALNHISNCEGVGKSVAYVKPASKLIGRVLNVMQDHGYIGNFEYIEDGRAGIYKVELIGQINKCGAVKPRYAVKKQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKNQGLGGRLISY 128
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18 Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L DAL I N E + K + + P S ++ L+ M+ YI +F+ D +R G+ KVEL G +N C + R VK E E + LP + +G +++TTP+G++ H EA R +GG++L Y + Sbjct: 7 LADALTNIRNNELQVKDSCVISPASKLIGEVLSTMQKENYIGNFEYIDDNRAGQFKVELEGNINKCGVIKPRHAVKKDEFEKFEKRYLPAKNFGILIVTTPEGIMTHYEAKERGIGGRLLAYMY 130 The following BLAST results are available for this feature:
BLAST of CN181895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181895 ID=CN181895; Name=CN181895; organism=Citrus sinensis; type=EST; length=686bpback to top |