CN181895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_SULIM (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_SULIL (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_SULIK (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_SULIA (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.27) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_STAMF (30S ribosomal protein S8P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 49/127 (38.58%), Postives = 74/127 (58.27%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIE---GYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I NAE R K+ + P S ++ + L +M+ GYI +F+ D R GKIKV+LLGR+N + R VK R++E + LP G ++++TP GVL H+EA+ + GG +L Y + Sbjct: 7 LANALATIQNAEMRAKSEALIWPASKLIINVLRVMQREGYIGEFEYIDDGRWGKIKVQLLGRINKTGVIKPRFPVKLRDLERMPHWLRKYLPAYNIGILILSTPHGVLSHKEAIAKKTGGVLLAYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METVO (30S ribosomal protein S8P OS=Methanococcus voltae GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 42/124 (33.87%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N E GK T L+P S ++ L +M+ +GYI +F+ + + G KV L+G++N C + R VK +E E + LP + +G ++++TP G++ H+EA +GG+++ Y + Sbjct: 7 LANALNHISNCENVGKNTAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVTLIGQINKCGAVKPRFAVKNQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKDSGIGGRLISYIY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METM6 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C + R VK + E + LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARSAGVGGRLISYIY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_DESK1 (30S ribosomal protein S8P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 236 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGY---TVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGY 601 L +AL AI NAE R K V + P S + + L +++ GYI +F+ D R GKIK++LLGR+N + R VK RE+ + LP G ++++TP GVL H+EA+ + GG +L Y Sbjct: 7 LANALSAIYNAEIRAKKEVVVWPASKLTLNVLKVLQREGYIGEFEYIDDGRWGKIKIQLLGRINKIGVIKPRYPVKHRELAEFPEWLKRYLPAYNIGVIIVSTPYGVLSHKEAVEKQTGGVLLAY 131
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_CALMQ (30S ribosomal protein S8P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 +L++AL ++ NAE RG V + P S ++ + L +M+ GY+ +F+ R GK V+LLGR+ND + R VK E++ + LP RQ G +++TT GV+ H EA VGG ++ Y + Sbjct: 6 VLSNALMSVKNAESRGDRQVIIWPSSKLIGNVLRVMQRYGYVGEFEYVYDGRGGKYVVQLLGRINDIGAIKPRFHVKVDELQKWEEKYLPARQVGILILTTSKGVVSHLEARENRVGGILVAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METVS (30S ribosomal protein S8P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps8p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL + N E GK L+P S ++ L +M+ +GYI +F+ + + G KV+L+G++N C + R VK +E E + LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130 The following BLAST results are available for this feature:
BLAST of CN181895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181895 ID=CN181895; Name=CN181895; organism=Citrus sinensis; type=EST; length=686bpback to top |