CN181895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METVA (30S ribosomal protein S8P OS=Methanococcus vannielii GN=rps8p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL + N E GK L+P S ++ L +M+ +GYI +F+ + + G KV+L+G++N C + R VK +E E + LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PYRAR (30S ribosomal protein S8P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 IL++AL I NAE GK V + P++ + L +++ GY+ + + D R GK V+LLG++ND + R VK REI + LP RQ G +VI+T GV+ H EA + +GG +L Y + Sbjct: 6 ILSNALIQIKNAEVMGKRQVTIWPVNKLTYYTLRVLQRYGYVGEIEYVDDGRGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVVSHIEAKEKKIGGVLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_IGNH4 (30S ribosomal protein S8P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHA---LPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N E RG + P S ++++ L IM+ GY+ +F+ D R GKI+V LLGR+N C + R V R++ H LP++ G ++I+T G++ H+EA+++ VGG + Y + Sbjct: 7 LANALTTIYNNEVRGNKEAIIMPASKLIANVLRIMQKEGYVGEFEYIDDGRWGKIRVRLLGRINKCGAIKPRVSVSYRDLLVLPEHLRRFLPSKDVGILIISTSQGLMTHKEAIQKRVGGIAIAYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_HALMA (30S ribosomal protein S8P OS=Haloarcula marismortui GN=rps8p PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = -2 Query: 230 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 595 +AL A+ NAE G + P S + S L + RGYI F D + G+ +VEL G +N+C + R A E E + LP R +G +V+TT G++ H EA + VGGQV+ Y + Sbjct: 9 NALSALNNAESVGHLEQTVSPASNEIGSVLEVFYDRGYIDGFSFVDDGKAGEFEVELKGAINECGPVKPRYSAGADEFEKWEKRFLPARDYGTLVVTTSHGIMSHYEAREQGVGGQVIAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 42/124 (33.87%), Postives = 69/124 (55.65%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 LND + +I NA R GK + +P + ++ L +M+ YIK F++ D R GK K+ L +N+C + R VK +E Y LP +G +++TT GV+ + EA + +GG++L Y + Sbjct: 6 LNDVINSIKNASRLGKREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_META3 (30S ribosomal protein S8P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 40/124 (32.26%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL + N ER GK +QP S ++ +M+ +GY+ +F+ + + G KVEL G +N C + R VK E E + LP + +G ++++TP G++ H+EA +GG+++ Y + Sbjct: 7 LANALNHLSNCERVGKDVAYVQPASKLIGRVFKVMQDKGYMGNFEYIEDGKAGIYKVELTGHINKCGAVRPRYAVKKTEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKSNGLGGRLISYIY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_SULTO (30S ribosomal protein S8P OS=Sulfolobus tokodaii GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I N E R + P S ++ + L M+ GYI +F+ D R GKI V+LLGR+N C + R +K ++ + Y LP+++ G ++I+T GV+ H++A+R +GG LGY + Sbjct: 7 LANALTTIYNNEMRRNKQAIIMPASKLIINVLRAMQKEGYIGEFEFIDDGRSGKIVVQLLGRINKCGPIAPRYPLKYKDLLTLPDYVRRYLPSKEIGVLIISTNKGVMTHKDAIRERIGGVALGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAR---EIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL + N E R + P S ++ S L +M+ GYI +F+ D R GKI V+LLGR+N C ++ R + + Y LP+++ G ++I+TP GV+ H + +R +GG LGY + Sbjct: 7 LANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METAC (30S ribosomal protein S8P OS=Methanosarcina acetivorans GN=rps8p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I NAE GK++ ++P S + + L +M+ GYI DF+ D + G V L+GR+N C + R V E + LP + +G +++TT GV+ EA + +GGQ+L Y + Sbjct: 7 LANALSTIKNAEAIGKSSCVVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTASFERWEKQFLPAKNFGALIVTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_THEVO (30S ribosomal protein S8P OS=Thermoplasma volcanium GN=rps8p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15 Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 LND + +I NA R G+ + +P + ++ L +M+ YIK F++ D R GK K+ L +N+C + R VK +E Y LP +G +++TT GV+ + EA + +GG++L Y + Sbjct: 6 LNDVINSIKNASRLGRREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYESRYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129 The following BLAST results are available for this feature:
BLAST of CN181895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181895 ID=CN181895; Name=CN181895; organism=Citrus sinensis; type=EST; length=686bpback to top |