CN181895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METHJ (30S ribosomal protein S8P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps8p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15 Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 230 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 595 DA+ + NA G+A +QP ++ L IMK GYIK++ + R G+ KV + G +N C ++ R V E+E + LP++ G ++I+T GV+ H +A R VGG++LGY + Sbjct: 9 DAMSTLKNASDTGRAECIVQPAGRLIGELLRIMKEAGYIKEYTRIEDGRGGQFKVVMSGLINKCGCISPRYSVSLDEMEYWEQLYLPSKNIGMLMISTSKGVMGHHDARRNGVGGELLGYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METBF (30S ribosomal protein S8P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps8p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I NAE GK++ ++P S + + L +M+ GYI +F+ D + G V L+GRVN C + R V E + LP + +G ++ITT GV+ EA + +GGQ+L Y + Sbjct: 7 LANALSTIKNAEAIGKSSCIIRPASKNIGNVLKVMQDLGYIGEFEFIDDGKAGIYSVTLVGRVNKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALIITTSSGVMSQYEAREKKIGGQLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_PYRAE (30S ribosomal protein S8P OS=Pyrobaculum aerophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 IL++AL I NAE GK + P++ + L +++ GY+ + + D + GK V+LLG++ND + R VK REI + LP RQ G ++I+T GV+ H EA R +GG +L Y + Sbjct: 6 ILSNALIQIKNAEIVGKKQAVIWPVNKLTYYTLRVLQRYGYVGEIEYIDDGKGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILIISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_METMA (30S ribosomal protein S8P OS=Methanosarcina mazei GN=rps8p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = -2 Query: 230 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 601 L +AL I NAE GK++ ++P S + + L +M+ GYI DF+ D + G V L+GR+N C + R V E + LP + +G +++TT GV+ EA + +GGQ+L Y + Sbjct: 7 LANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_NANEQ (30S ribosomal protein S8P OS=Nanoarchaeum equitans GN=rps8p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = -2 Query: 230 MGRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 616 M R I+ D L + N R+G+ P+S ++ + IMK GYIK+++L D R I++EL N+ + R V+ E+E Y LP +G ++++T G++ + EA + +GG ++ Y + Sbjct: 1 MARDIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_KORCO (30S ribosomal protein S8P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps8p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 40/122 (32.79%), Postives = 60/122 (49.18%), Query Frame = -2 Query: 236 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGY 601 L DA+ + N GK V + S ++ L ++K GYI +F+ D R GK V L GR+N + R VK E + LP G ++++T GV+ H EA R +GG ++ Y Sbjct: 7 LADAMSTLTNGSMLGKREVVINIASKLIGKVLKVLKEHGYIDEFEYVDDGRFGKYVVRLNGRINKAGVIKPRFPVKVGEFSRWEKIYLPAENVGLIIVSTNQGVMTHREAKERGIGGVLIAY 128
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_NITMS (30S ribosomal protein S8P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps8p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 IL + + N E R K + P S + L ++ GYI +F+ D R GK K++LL ++ C ++ R VK E + LP G +++TT GV+ H EA ++ +GG ++GY + Sbjct: 6 ILANLFVTLYNNETRRKGECTILPTSKLGIEVLKTLQKDGYIGEFEHIDDKRGGKFKIKLLAKITKCGAISPRFKVKTDEFNNWEQQYLPAYDRGMLLVTTNQGVMSHHEATQKGIGGFLIGYVY 130
BLAST of CN181895 vs. ExPASy Swiss-Prot
Match: RS8_CENSY (30S ribosomal protein S8P OS=Cenarchaeum symbiosum GN=rps8p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13 Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = -2 Query: 230 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 604 IL + + N E R + ++ P S + L +K GYI +F+ + R GK V LL ++ C ++ R VK E + LP+ G +V+TT GV+ H EA R +GG ++GY + Sbjct: 6 ILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130 The following BLAST results are available for this feature:
BLAST of CN181895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181895 ID=CN181895; Name=CN181895; organism=Citrus sinensis; type=EST; length=686bpback to top |