CN181894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_HALSA (30S ribosomal protein S8P OS=Halobacterium salinarium GN=rps8p PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 8.108e-18 Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L+DAL I NAE G T + P S ++ S L + RGYI F+ D + G+ +VEL G +N+C + R V A E + LP R +G +V+TT G++ H EA +GGQV+ Y + Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_HALS3 (30S ribosomal protein S8P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.108e-18 Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L+DAL I NAE G T + P S ++ S L + RGYI F+ D + G+ +VEL G +N+C + R V A E + LP R +G +V+TT G++ H EA +GGQV+ Y + Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_HALLT (30S ribosomal protein S8P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.108e-18 Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 154 GRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 G +AL + NAE G + ++P S ++ S L ++ RGY+ F+ D + GK +VEL G +N+C + R A E E + LP R +G +++TT GV+ H EA +GGQV+ Y + Sbjct: 3 GNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METTH (30S ribosomal protein S8P OS=Methanobacterium thermoautotrophicum GN=rps8p PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.059e-17 Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL I N E RG + P S ++ L M+ GYI +F+ D R GK VEL G +N C + R VK E E + LP + +G ++++TP+G++ H+EA R +GG++L Y + Sbjct: 7 LANALTNIRNNEIRGNVKCRITPASKLIGRVLRTMQKEGYIGEFEYVDDGRAGKFIVELEGNINHCGVIKPRHAVKKDEFEKFEKRYLPAKNFGIIIVSTPEGIMTHKEAKDRGIGGRLLAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_PYRCJ (30S ribosomal protein S8P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.383e-17 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +L++AL AI NAE GK V + P++ ++ L +++ GY+ + + D R GK V+LLG++ND + R VK REI + LP RQ G +VI+T GV+ H EA + +GG +L Y + Sbjct: 6 LLSNALTAIKNAEAMGKRQVVIWPVNKLIYYTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGAIRPRFPVKYREIVEWEQKYLPARQIGILVISTSQGVMSHLEAKEKKIGGVLLAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METB6 (30S ribosomal protein S8P OS=Methanoregula boonei (strain 6A8) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.383e-17 Identity = 42/122 (34.43%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 172 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 D + A+ NA GK+ V ++P S ++ + L IM+ GYI F+ + R G++KV L G++N C + R V+ E+E + LP + +G ++++T GV+ H +A R +GG++LGY + Sbjct: 9 DGMSALKNAGDTGKSEVTIEPASKLLGAMLRIMQDAGYIAGFEFIEDGRGGQLKVHLTGKINKCGAICPRFSVQLDEMEYWEKQYLPGKNFGLMILSTSHGVMSHVQARREGIGGELLGYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_NATPD (30S ribosomal protein S8P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.806e-17 Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L AL + NAE G +QP S + S L + RGY+ FQ D + G+ +VEL G +N+C + R A E E + LP R +G +++TT GV+ H EA + +GGQV+ Y + Sbjct: 7 LASALSGLDNAESVGHLEQTIQPASNEIGSVLEVFYDRGYVDGFQFVDDGKAGRFEVELKGAINECGAVKPRYSAGADEFEKWEKRFLPARDYGTLIVTTSHGVMSHYEAREQGIGGQVIAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.806e-17 Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L DA+ I NAE GK ++P S +++ L +M GYI +F+ D + G KV+LLGR+N C + R +K E+E + LP R +G ++++T GV+ H +A R +GG +L Y + Sbjct: 6 LADAMSTIKNAENVGKPECIIKPASKLIAMTLKVMADLGYIGEFEFIDDGKSGMFKVKLLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGGHLLAYVY 129
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_THEGJ (30S ribosomal protein S8P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.359e-17 Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+L+G++N + R VKA+ E + LP ++G ++++T GV+ H+EA + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAKNYEYWEKRFLPAFEFGILIVSTSQGVMTHKEAREKGIGGRLIAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METPE (30S ribosomal protein S8P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.081e-17 Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 172 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 DA+ A+ NA GK L+P S ++ + L IM+ GYI F + D R G+ +V L GR+N C +T R V E+E + LP + +G ++++T GVL H +A + +GG++LG+ + Sbjct: 9 DAMSALKNAGDCGKPECILEPSSKLLGAMLRIMQDAGYIGSFDMIDDGRGGQFRVHLSGRINKCGAITPRYSVGLDELEYWETRYLPGKNFGLLILSTSRGVLTHNQARQNGIGGELLGFVY 130 The following BLAST results are available for this feature:
BLAST of CN181894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181894 ID=CN181894; Name=CN181894; organism=Citrus sinensis; type=EST; length=648bpback to top |