CN181894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METMP (30S ribosomal protein S8P OS=Methanococcus maripaludis GN=rps8p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.081e-17 Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C + R VK + E + LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METM5 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.081e-17 Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C + R VK + E + LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_SULSO (30S ribosomal protein S8P OS=Sulfolobus solfataricus GN=rps8p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.024e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYVRRYLPSKEIGIIIVSTSKGVMSHKEAARLRIGGVALGYVY 133
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METST (30S ribosomal protein S8P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.024e-17 Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L DAL I N E +G + ++P S ++ L+ M+ YI +F+L D + G VEL+G +N C + R VK E E Y LP + +G +++TTP GV+ H EA +GG++L Y + Sbjct: 7 LADALTNIRNNELQGNDSCVIKPASKLIGHVLSTMQKENYIGNFELVDDGKAGIFNVELVGNINKCGVIKPRHAVKNTEFEDYEKRYLPAKNFGILIVTTPQGVMTHHEAKEAGIGGRLLVYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_THENV (30S ribosomal protein S8P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17 Identity = 47/125 (37.60%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +L++AL I NAE GK V + P++ ++ L +++ GY+ + + D R GK V+LLG++ND + R VK REI + LP RQ G +VI+T GV+ H EA + +GG +L Y + Sbjct: 6 LLSNALIQIKNAEAMGKRQVAIWPVNKLIYYTLRVLQRHGYVGEVEYIDDGRGGKYVVQLLGKINDIGPIKPRYPVKYREIVQWEQKFLPARQIGILVISTNQGVMSHVEAKEKKIGGVLLAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17 Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +L++AL I NAE GK V + P++ ++ L +++ GY+ + + D R GK V+LLG++ND + R VK REI + LP RQ G +VI+T GV+ H EA R +GG +L Y + Sbjct: 6 LLSNALIQIKNAEIMGKKQVVIWPVNKLIYHTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METMJ (30S ribosomal protein S8P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17 Identity = 41/122 (33.61%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 172 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 DA+ I NA GK V ++P S ++ + L +M+ G+I F+ D R G+ +V+L G +N C ++ R V ++E + LP + +G ++++T GV+ H EA +GGQ+LGY + Sbjct: 9 DAMSTIKNAGDAGKGEVIVEPASKLLGAMLRVMQENGFISGFEFIDDGRGGQFRVQLSGTINKCGAISPRFPVAMADMEYWESQYLPAKNFGILIVSTSKGVISHAEARNEGIGGQLLGYVY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_METM7 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17 Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C + R VK + E + LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_SULIY (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.864e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS8_SULIN (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.864e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 166 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKARE---IEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133 The following BLAST results are available for this feature:
BLAST of CN181894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181894 ID=CN181894; Name=CN181894; organism=Citrus sinensis; type=EST; length=648bpback to top |