CN181890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 78/149 (52.35%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH G A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 78/149 (52.35%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH G A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_ASPFU (Superoxide dismutase [Cu-Zn] OS=Aspergillus fumigatus GN=sodC PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 81/152 (53.29%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 MVKAVAVL G + GTV+F Q + + PTTVS ++ G P GFHVH GD TNGC S GPHFNP GK HG PED RH G A + D I L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDSKITGTVTFEQADENSPTTVSWNIKGNDPNAKRGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDSERHVGDLGNFETDAEGNAVGSKQDKLIKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGARPACGVIGI 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 75/148 (50.68%), Postives = 91/148 (61.49%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV VL G V+ T+ F Q+G GP V G ++GL G H FHVH GD GC S GPHFNP K+HG P+DE RH G A + D+ I LSG S+IGR +VVH DDLGKGG++ S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGI 151
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_CORMI (Superoxide dismutase [Cu-Zn] OS=Cordyceps militaris GN=SOD1 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 MVKAV VL G V GTV+F QE + PTT++ ++G P GFH+H GD TNGC S GPHFNP GK HG P D RH G A +V D+ + L GP+S++GR VVVH DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVLRGDAKVAGTVTFEQESESAPTTITWDITGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNIKTDGQGNAKGSVQDSHVKLIGPHSVVGRTVVVHGGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.330e-36 Identity = 79/150 (52.67%), Postives = 96/150 (64.00%), Query Frame = -2 Query: 174 KAVAVLGGTEG-VKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV VL G VKG ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH G A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 152.14 bits (383), Expect = 2.269e-36 Identity = 81/152 (53.29%), Postives = 93/152 (61.18%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 M KAVAVL G V G V+F Q + PTT++ +SG GFHVH GD TNGC S GPHFNP KEHG PED+NRH G A + D + L G NSI+GR VV+HA DDLGKGG+ SK TGNAG R ACG+IGL Sbjct: 1 MAKAVAVLRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQDLFVKLIGQNSILGRTVVIHAGTDDLGKGGNAESKKTGNAGARPACGVIGL 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.964e-36 Identity = 80/152 (52.63%), Postives = 94/152 (61.84%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 MVKAVAVL G V GTV F QE + PTT++ ++G GFH+H GD TNGC S GPHFNP GK HG P DE RH G A +V D + L GP+S+IGR VV+HA DDLGKG +E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.964e-36 Identity = 79/152 (51.97%), Postives = 94/152 (61.84%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 MVKAVAVL G + GTV+F Q + + PTTVS +++G FHVH GD TNGC S GPHFNP GKEHG PEDENRH G A + D I L G S++GR +V+HA DDLG+ H SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_YARLI (Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytica GN=SOD1 PE=3 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36 Identity = 80/152 (52.63%), Postives = 92/152 (60.53%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 MVKAVAVL G V GTV+F Q+ + GP TV+ + G P GFHVH GD TNGC S GPHFNP K HG P D RH G A + D+ + L+G NSI+GR VV+H DDLGKGGH S TGNAG R ACG+IGL Sbjct: 1 MVKAVAVLRGDSKVSGTVTFEQDSESGPVTVTYDIKGNDPNAERGFHVHEFGDNTNGCTSAGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAKGVLKDSLLKLTGDNSIVGRTVVIHGGEDDLGKGGHADSLKTGNAGPRPACGVIGL 152 The following BLAST results are available for this feature:
BLAST of CN181890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181890 ID=CN181890; Name=CN181890; organism=Citrus sinensis; type=EST; length=651bpback to top |