CN181874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ2_MOUSE (Coatomer subunit zeta-2 OS=Mus musculus GN=Copz2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.861e-19 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = -2 Query: 287 FEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 706 FEK VF KT +RTE+EIA L G IVYK D+ +V G ENEL+L +VL FD++ +LR NV+K+ VDGG+ILE+D + KV + D G L+EQ+++Q L +A+E + SLLK Sbjct: 72 FEKNVFNKT----SRTESEIAFLGGMTIVYKSSIDIFLYVVGSSSENELMLMSVLACLFDSLSHILRKNVEKRWLLENMDGAFLVLDETVDGGVILESDPQQVIQKVNFRTDDSG--LTEQSVAQVLQSAKEQIKWSLLK 205
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ2_HUMAN (Coatomer subunit zeta-2 OS=Homo sapiens GN=COPZ2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = -2 Query: 287 FEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 706 FEK VF KT +RTE+EIA G IVYK DL +V G ENEL+L +VL F+++ +LR NV+K+ IVDGG+ILE+D + KV + D G L+EQ+++Q L +A+E + SLLK Sbjct: 77 FEKNVFNKT----SRTESEIAFFGGMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLDEIVDGGVILESDPQQVIQKVNFRADDGG--LTEQSVAQVLQSAKEQIKWSLLK 210
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ_CAEEL (Probable coatomer subunit zeta OS=Caenorhabditis elegans GN=F59E10.3 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQA----LATAREHLTRSLLK 712 +AFEK++F+KT + T A+I +L+G +Y+ DL+F+V G ENEL L L +DAV ++LR NV+KK I D GII+ETDA + + A S +V S+Q++SQ + +A E SLLK Sbjct: 44 KAFEKSLFSKTSRN---TSADILLLDGVTCLYRSNVDLYFYVLGSTRENELFLDATLTCLYDAVSVVLRKNVEKKALIDSMDTIMLIIDEICDEGIIMETDAQAVVQRTALKSDEVS--FSDQSVSQIGFSFMKSANEQFKWSLLK 184
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ_SCHPO (Probable coatomer subunit zeta OS=Schizosaccharomyces pombe GN=ret3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKV----ASHSVDVGAPLSEQTISQALATAREHLTRSLLK 712 + FEK +F KT KT + +I +G ++V V D+ F++ GG +ENE++L L+ DA+ LL + DK+ +D G+ILET+ +IA +V S + + + E + ARE +T +LK Sbjct: 46 KTFEKGLFEKTWKT----QNDILTYDGKLVVMLTVMDVIFYIVGGMEENEVMLYECLRSIRDALELLFKYVPDKRTLLENYDQLVIVVDETIDDGVILETEPALIAARVTKGPVSEAQAIVSDFKEMGFMNSFQKAREKITERILK 187
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZA_DICDI (Probable coatomer subunit zeta-A OS=Dictyostelium discoideum GN=copza PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 305 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAV-GLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHL 712 +AFEK VF KT K N EI +L+ ++VYK ++ ++ G +++NE+ L VL F D + L ++KK I+DGGII+E+D+ VIA +V + D +++I++A+ + +E L Sbjct: 38 KAFEKKVFDKTSKVNFG--GEITLLDNYLVVYKSFSNIIIYMVGDQNQNEIALLYVLNSFIDTLQNLFENSQINKKLILDGINYTLLTLDEIIDGGIIMESDSAVIADRVGIKAPDNDD--LDESINKAVTSVKEQL 170 The following BLAST results are available for this feature:
BLAST of CN181874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181874 ID=CN181874; Name=CN181874; organism=Citrus sinensis; type=EST; length=713bpback to top |