CN181869

Overview
NameCN181869
Unique NameCN181869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28
Identity = 77/213 (36.15%), Postives = 110/213 (51.64%), Query Frame = 3
Query:   33 IKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLP----AMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASD 656
            I  +LL   L+  ++ F     G+ YGR GN LP PA VV    ++    I  +RI+DP+   L AL  SN+ + LGV N DL  +A S      WV+  V  Y     G +K RYI  GNE+ P  E    +P    AM+NIQ  +    + N + VST +       + PPSNG F  +V   +  I  F+ +  APL++N+YPYF +A++
Sbjct:    5 IVTLLLLSVLTLATLDFTGAQAGVCYGRQGNGLPSPADVVSLCNRN---NIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVRNY-----GNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLVNLYPYFAIANN 209          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 82/214 (38.32%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   39 VMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP---GTE--AVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            VMLL    +  S+      VG+ YG  GNNLPP + V+    K     I  +RI+DP   VL AL  SN+ + LGV N DL  +    +  ++WV++ V    +G   ++  RYI  GNEI P   GT   A +VLPAM+NI   +    + + + VST +    +G+SYPPS G+F  +V + L+ I  F+ S  +PL+ N+YPYFT A +P+
Sbjct:   20 VMLLLFFFAA-SVGITDAQVGVCYGMQGNNLPPVSEVIALYKKS---NITRMRIYDPNRAVLEALRGSNIELILGVPNSDLQSLTNPSN-AKSWVQKNV----RGFWSSVLFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLDPIIGFLSSIRSPLLANIYPYFTYAYNPR 224          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 79/215 (36.74%), Postives = 119/215 (55.35%), Query Frame = 3
Query:   33 IKVMLLAMALSHDSMAFGAGT---VGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTE-AVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            I ++LL   L   S+A    T   +G+  G +G++LPP A VV  L K  N  IP +R++DP P  L AL  SN+ + LGV N++L  +A S      WV+  V  Y       +K +YI  GNE+ P    A +++PAM+NIQ+ +    +   + VST +    LG ++PPS GSF +E    L  I +F+ S  +PL++N+YPYF  + + Q
Sbjct:   16 ISIVLLLGQLVVGSLATKQHTGAPIGVCNGMVGDDLPPQAEVVA-LYKTNN--IPRMRLYDPNPAALEALRGSNIKLLLGVPNENLQYIALSQANANAWVQNNVRNYAN-----VKFKYIAVGNEVKPSDSFAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQ 222          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 69/194 (35.57%), Postives = 109/194 (56.19%), Query Frame = 3
Query:   96 VGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP----GTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            +G+ YG +GNNLP    V+     +    I  +R++DP    L AL  S + + LGV N DL  +A + D  R WV+  V  +      ++K++YI  GNE+ P       A YVLPA++N+ Q +  + + + + VST +    +G+SYPPS GSF  +V + L+ I  ++    APL +NVYPYF+ + +P+
Sbjct:    2 IGVCYGMMGNNLPSANEVINLYRSN---NIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWP----SVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSFRGDVRSYLDPIIGYLLYASAPLHVNVYPYFSYSGNPR 188          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 76/217 (35.02%), Postives = 124/217 (57.14%), Query Frame = 3
Query:   24 TMAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP--GTEAV--YVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            T  I V++L   L   ++      +G+ YG +GNNLP  + V++ L K  N  I  +R++DP    L+AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P  GT ++  + +PA+ NI + + +  + N + VST +    +G+SYPPS GSF  +V    + I  F+    APL++N+YPYF+ + +P
Sbjct:    3 TSQIAVIVLLGLLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQ-LYKSRN--IGRLRLYDPNQGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNP 212          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 74/217 (34.10%), Postives = 122/217 (56.22%), Query Frame = 3
Query:   24 TMAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTE----AVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            T  I +++L   L   ++      +G+ YG +GNNLP  + V++ L K  N  I  +R++DP    L+AL  SN+ V LG+ N D+  ++  M++ R WV++ V  +       +K++YI  GNEI P T     A + +PA+ NI + + +  + N + VST +    +G+SYPPS GSF  +V    + I  F+    APL++N+YPYF+ + +P
Sbjct:    3 TSQIAIIVLLGLLVATNIHITEAQIGVCYGMMGNNLPSHSEVIQ-LYKSRN--IRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPH----VKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNP 212          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27
Identity = 71/193 (36.79%), Postives = 115/193 (59.59%), Query Frame = 3
Query:   96 VGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP--GTEAV--YVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            +G+ YG +GNNLP  + V++ L K  N  I  +R++DP    L+AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P  GT ++  + +PA+ NI + + +  + N + VST +    +G+SYPPS GSF  +V    + I  F+    APL++N+YPYF+ + +P
Sbjct:    1 LGVCYGMMGNNLPSHSEVIQ-LYKSRN--IGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNP 186          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 66/189 (34.92%), Postives = 104/189 (55.03%), Query Frame = 3
Query:   96 VGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            +G+ YG + NNLPP   VV+         I ++RI+  +P+ + AL  S + + LG  N D+A +AGS+    +WV   V PY   G   + +RYI  GNEI  G  A  +L AM+N+ + L    +  + VST +    + +S+PPS+  FA      + +I++ + S  APL+ NVYPYF  + +P+
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSK---GITNMRIYSVQPQAIRALHGSGIRLMLGTTNNDVAVLAGSLSAATSWVHANVKPYHSAG---VTIRYIAVGNEITGGA-AQSILAAMRNLNKALAAARLGGIKVSTAVRFDVITNSFPPSSAVFAQPY---MVDIARHLASTNAPLLANVYPYFAYSGNPR 179          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 68/191 (35.60%), Postives = 107/191 (56.02%), Query Frame = 3
Query:   93 TVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQD-LAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            T+G+ YG + NNLPP   VV+    +    +  +RI+  + + LSAL  S + + L V   D LA +A +     NWVR+ V PY    N    ++YI AGNE+  G +   ++PAM+N+   L+   +  + VST +   A+ +++PPSNG FA    T   ++++ + S GAPL+ NVYPYF    +P+
Sbjct:    1 TIGVCYGVVANNLPPANEVVQLYRSN---GLTGMRIYFADAKALSALRGSGIGLILDVGGNDVLASLAANASNAANWVRDNVRPYYPAVN----IKYIAAGNEVWGG-DTQNIVPAMRNLGAALKAPGLGTIKVSTSIRFDAVTNTFPPSNGVFAQAYMT---DVARLLASTGAPLLTNVYPYFAYKDNPR 180          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 61/162 (37.65%), Postives = 89/162 (54.94%), Query Frame = 3
Query:  192 VRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP----GTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            +RI+DP  + L AL  S + + L V N  L  +A        WV+  V  Y       +K RYI  GNE++P       A YVLPAMKN+Q  +    +   + VST   ++ LG+SYPPS GSF+++ ++ +N I  F+   G+PL+ N+YPYF+   D Q
Sbjct:    1 MRIYDPNSDTLQALKGSGIELILDVPNTSLQSLASDASAASTWVQNNVVNYASD----VKFRYIAVGNEVLPTGSNAQYAQYVLPAMKNVQSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSDASSFINPIISFLAENGSPLLANIYPYFSYTGDTQ 158          
The following BLAST results are available for this feature:
BLAST of CN181869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
E13H_TOBAC1.046e-2836.15Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13B_HEVBR1.784e-2838.32Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_PRUPE2.330e-2836.74Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13B_PHAVU3.044e-2835.57Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E132_SOLTU3.975e-2835.02Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13B_SOLLC8.855e-2834.10Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E131_SOLTU2.577e-2736.79Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E13D_HORVU1.414e-2534.92Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13A_HORVU2.412e-2535.60Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
E13B_VITVI3.150e-2537.65Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181869 ID=CN181869; Name=CN181869; organism=Citrus sinensis; type=EST; length=664bp
GATACCATATCAAGATGAAGACCACAATGGCGATCAAGGTCATGCTGCTT
GCTATGGCTCTGTCTCACGATTCCATGGCATTCGGAGCTGGCACTGTTGG
CATCAATTATGGGAGACTTGGTAACAATCTCCCACCGCCAGCACGCGTAG
TCGAATTCCTGACGAAAGATCTTAATTATGCAATCCCATCGGTAAGGATA
TTTGATCCGGAACCCGAAGTCTTGAGTGCATTGGCCACATCAAACTTGAG
CGTATGCTTAGGGGTGAAAAATCAAGACCTTGCACAAATGGCCGGAAGCA
TGGACTACACACGAAATTGGGTTCGAGAATTTGTGACTCCATACACTAAA
GGCGGAAACGGAACCCTAAAACTCCGGTACATCACAGCCGGCAACGAGAT
TATCCCCGGCACCGAAGCCGTATATGTCCTGCCGGCCATGAAGAACATTC
AACAAGTACTAGAACAAGAAAATGTACCTAATGTCGGTGTATCAACTGTG
CTGTCAGCTGCTGCCCTAGGTTCCTCGTACCCACCATCAAACGGCTCATT
TGCTACTGAAGTGGCTACTACTTTGAATGAAATATCAAAATTTGTGTACT
CTAAAGGAGCTCCGTTGATGATCAATGTGTATCCTTATTTTACCCTAGCT
TCTGACCCTCAACA
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