CN181869

Overview
NameCN181869
Unique NameCN181869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 69/190 (36.32%), Postives = 105/190 (55.26%), Query Frame = 3
Query:   87 AGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASD 656
            AG +G+ YG LG+ LP P+ VV  L K  N  I  +R++ P+P  L+AL  S++ + L V + DL ++A S      WV+E V  Y  G    ++ RYI  GNE+ P     ++L AM+NI+  +    +  V VST ++      + PPS G F  E  + L  +  F+ SK +PL++N+YPYF+   D
Sbjct:   29 AGQIGVCYGMLGDTLPSPSDVVA-LYKQQN--IQRMRLYGPDPGALAALRGSDIELILDVPSSDLERLASSQTEADKWVQENVQSYRDG----VRFRYINVGNEVKPSVGG-FLLQAMQNIENAVSGAGL-EVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGD 209          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 64/195 (32.82%), Postives = 106/195 (54.36%), Query Frame = 3
Query:   87 AGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP---GTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEV-ATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            A  +GINYGR GNNLP P + + F+    +     V+++D +PE L+ L+ +NL V + V N  +  ++ +      WVR  + PY        ++R++  GNEI+    G  +V ++PAM+ I   L    + N+ V T L+  +L SS+PPSNG+F  E+    +  + KF+    +   +NV+PYF  + +P
Sbjct:   39 ASKIGINYGRRGNNLPSPYQSINFIK---SIKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYP----QTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGIHNIKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNP 226          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24
Identity = 67/184 (36.41%), Postives = 108/184 (58.70%), Query Frame = 3
Query:  123 NNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP--GTEAV--YVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            NNLP  + V++ L K  N  I  +R++DP    L+AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P  GT ++  + +PA+ NI + + +  + N + VST +    +G+SYPPS GSF  +V    + I  F+    APL++N+YPYF+ + +P
Sbjct:    1 NNLPSHSEVIQ-LYKSRN--IGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNP 177          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24
Identity = 66/190 (34.74%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   93 TVGINYGRLGNNLPPPARVVE-FLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            ++G+ YG +GNNLP  + VV+ + +K +N     +RI+  + + LSAL  S + + L + N  LA +A S     +WV+  V PY    N    ++YI AGNE + G     +LPAM+N+   L    +  + VST +    + +S+PPS G F     T   ++++ + S GAPL+ NVYPYF    +P
Sbjct:   28 SIGVCYGVIGNNLPSRSDVVQLYRSKGIN----GMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPYYPAVN----IKYIAAGNE-VQGGATQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSFPPSAGVFKNAYMT---DVARLLASTGAPLLANVYPYFAYRDNP 205          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.728e-23
Identity = 68/218 (31.19%), Postives = 111/218 (50.92%), Query Frame = 3
Query:   18 KTTMAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTE---AVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            K   +I ++LL +   +       G VG+ YGR  ++LP P++VV+ + +   + I  VRI+D   +VL A   +++ + +GV N DL   + S      W++  V PY      T K+ YIT G E         + +V+PAM+N+   L +  +   + VST LS   L  S+PPS G+F +  A  L  + +F+    +P MI++YPY+     P
Sbjct:    6 KLIFSISILLLLLDCCY------GGKVGVCYGRSADDLPTPSKVVQLIQQ---HNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYP----TTKITYITVGAESTDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSPFMIDLYPYYAYRDSP 210          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 3
Query:   93 TVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            ++G+ YG   NNLP  + VV     +    I S+R++ P    L A+  + ++V +G  N  L+ +A S     +WV+  +  Y K     +  RY+  GNE+  G     V PAMKN+   L    + ++ V+T +S A LG   PPS GSF  E A  +  + +F+    APLM N+YPY   A +P
Sbjct:    6 SIGVCYGMSANNLPAASTVVSMFKFN---GIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNIQAYPK-----VSFRYVCVGNEVAGGATRNLV-PAMKNVHGALVAAGLGHIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYLAWAYNP 185          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 67/196 (34.18%), Postives = 101/196 (51.53%), Query Frame = 3
Query:   84 GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTE----AVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASD 656
            GA  +G+ YG++ NNLP    V++    +    I  +RI+ PE  V +AL  SN+ + L V NQDL  +A      + WV++ +  +       +K +YI  GNE+ PG +    A +V PAM+NI   L    + N + VST      L ++YPP +  F  E  + +N I  F+     PL+ N+YPYF  A D
Sbjct:   22 GAQPIGVCYGKIANNLPSDQDVIKLYNSN---NIKKMRIYFPETNVFNALKGSNIEIILDVPNQDLEALANPSK-RQGWVQDNIRNHFPD----VKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVSTATYLGLLTNTYPPRDSIFRDEYKSFINPIIGFLSRHNLPLLANIYPYFGHADD 209          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22
Identity = 66/198 (33.33%), Postives = 101/198 (51.01%), Query Frame = 3
Query:   84 GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVT---PYTKGGNGTLKLRYITAGNEIIPGTEAVY---VLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASD 656
            GA ++G+ YG+  NNLP    V+     +    I  +RI+ P+  +  AL  SN+ + LGV NQDL  +A S      WV++ +    PY       +K +YI+ GN++ P     Y   +L AMKN+   L    + + + VSTV  +  L ++YPP    F  E  + +N I +F+     PL+ NVYPYF   S+
Sbjct:    8 GAQSIGVCYGKAANNLPSDQDVINLYNAN---GIRKLRIYYPDKNIFKALNGSNIEIILGVPNQDLEALANS-SIANGWVQDNIRSHFPY-------VKFKYISIGNKVSPTNNDQYSEFLLQAMKNVYNALAAAGLQDMIKVSTVTYSGVLANTYPPERSIFREEFKSFINPIIQFLARNNLPLLANVYPYFVHVSN 194          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22
Identity = 69/211 (32.70%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   42 MLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYV---LPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            +LL + L+      G G VGINYG++ NNLP PARV   L + LN  I  V+++D +P VL + + S +   +G+ N+ L  M+      ++W+++ + P+        ++  I  GNEI    + V +   LPAMK++   L    +   V V++  S   L +SYPPS+GSF  E    L  +  F     +P +IN YP+F     P+
Sbjct:   12 VLLLLFLTLSERIKGQG-VGINYGQIANNLPSPARVAVLL-RSLN--ITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHIS----KTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPK 214          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22
Identity = 64/201 (31.84%), Postives = 104/201 (51.74%), Query Frame = 3
Query:   72 SMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVY---VLPAMKNIQQVLEQENV-PNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            S+     ++GINYG++ NNLPPP  V+  L    +     V+++D +P+ L A A S   + + + N+ LAQM+  +   + WV+E V  Y        K+  I  GNE++   ++     + PAM++I   L    +   + V+T  S A L  SYPPS  SF  ++  +L  I  F    G+P++IN YP+F    +P+
Sbjct:   19 SLPLIVSSIGINYGQVANNLPPPKNVIPLLK---SVGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQMSDPIK-AQGWVKENVQAYLPN----TKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPK 211          
The following BLAST results are available for this feature:
BLAST of CN181869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
E13A_ARATH3.150e-2536.32Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
EA6_ARATH4.113e-2532.82Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E133_SOLTU2.666e-2436.41Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13B_HORVU5.940e-2434.74Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E1313_ARATH1.728e-2331.19Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
GUB2_HORVU6.567e-2333.33Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=... [more]
E13A_SOLLC6.567e-2334.18Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E13K_TOBAC1.120e-2233.33Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E1314_ARATH5.560e-2232.70Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E1310_ARATH5.560e-2231.84Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181869 ID=CN181869; Name=CN181869; organism=Citrus sinensis; type=EST; length=664bp
GATACCATATCAAGATGAAGACCACAATGGCGATCAAGGTCATGCTGCTT
GCTATGGCTCTGTCTCACGATTCCATGGCATTCGGAGCTGGCACTGTTGG
CATCAATTATGGGAGACTTGGTAACAATCTCCCACCGCCAGCACGCGTAG
TCGAATTCCTGACGAAAGATCTTAATTATGCAATCCCATCGGTAAGGATA
TTTGATCCGGAACCCGAAGTCTTGAGTGCATTGGCCACATCAAACTTGAG
CGTATGCTTAGGGGTGAAAAATCAAGACCTTGCACAAATGGCCGGAAGCA
TGGACTACACACGAAATTGGGTTCGAGAATTTGTGACTCCATACACTAAA
GGCGGAAACGGAACCCTAAAACTCCGGTACATCACAGCCGGCAACGAGAT
TATCCCCGGCACCGAAGCCGTATATGTCCTGCCGGCCATGAAGAACATTC
AACAAGTACTAGAACAAGAAAATGTACCTAATGTCGGTGTATCAACTGTG
CTGTCAGCTGCTGCCCTAGGTTCCTCGTACCCACCATCAAACGGCTCATT
TGCTACTGAAGTGGCTACTACTTTGAATGAAATATCAAAATTTGTGTACT
CTAAAGGAGCTCCGTTGATGATCAATGTGTATCCTTATTTTACCCTAGCT
TCTGACCCTCAACA
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