CN181869

Overview
NameCN181869
Unique NameCN181869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 3
Query:    3 YHIKMKTTMAIKVMLLAMALSHDSMAFGA-GTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVT---PYTKGGNGTLKLRYITAGNEIIP---GTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYF 641
            +++  K ++   V++L   L  +    GA   +G+ YG + NNLP    V+     +    I  +RI+ P+  +  AL  SN+ + L V NQDL  +A S      WV++ +    PY       +K +YI+ GNE+ P   G  + ++L AMKN+   L    + + + VST   +  L ++YPP +  F  E+ + +N I +F+     PL+ N+YPYF
Sbjct:    4 WYLFNKRSLGAAVLILVGLLMCNIQITGAQSNIGVCYGEIANNLPSEQDVINLYKAN---GIRKMRIYYPDTNIFKALNGSNIEIILEVPNQDLEALANS-SIANGWVQDNIRSHFPY-------VKFKYISIGNEVSPTNNGQYSQFLLHAMKNVYNALAAAGLQDKIKVSTATYSGLLANTYPPKDSIFREELKSFINPIIEFLARNNLPLLANIYPYF 213          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 66/217 (30.41%), Postives = 111/217 (51.15%), Query Frame = 3
Query:   27 MAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVT---PYTKGGNGTLKLRYITAGNEIIP---GTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASD 656
            +A  ++L+ + +    M  GA ++G+ YG++ NNLP    V+     +    I  +RI+ P+  +  AL  SN+ + L V NQDL  +A S      WV++ +    PY       +K +YI+ GNE+ P   G  + ++L AM+N+   L    + + + V+T   +  L ++YPP    F  E  + +N I +F+     PL+ NVYPYF   S+
Sbjct:   10 LAAALVLVGLLMCSIQM-IGAQSIGVCYGKIANNLPSEQDVINLYKAN---GIRKMRIYYPDKNIFKALKGSNIEIILDVPNQDLEALANS-SIANGWVQDNIRSHFPY-------VKFKYISIGNEVSPINNGQYSQFLLHAMENVYNALAASGLQDKIKVTTATYSGLLANTYPPKASIFRGEFNSFINPIIQFLAQNNLPLLANVYPYFVHISN 214          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 74/214 (34.58%), Postives = 108/214 (50.47%), Query Frame = 3
Query:   27 MAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQ---DLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEA---VYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALG-SSYPPSNGSFATEVATTL-NEISKFVYSKGAPLMINVYPYFT 644
            + I +MLLA   +    A  +  +G+NYG   +NLP P  V  FL       I  V++FD  P  +SA A + +S+ + + N     LA  A  +D  R+W+R  ++PY    N TL L    AGNEI+  T+    + +LPAM+ + Q L+ E +  V V+T      L  S   PSN SF     T L   + +F    G+P M+N YPYF+
Sbjct:    3 LLILLMLLAAGAAGAESATPSLHIGVNYGANADNLPSPTSVATFLA--TKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLL----AGNEILLSTDTNLILSLLPAMRRLAQALKAEGLTGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFS 210          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 3
Query:   27 MAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVY---VLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYF 641
            +A  ++L+ + +    M  GA ++G+ YG+  NNLP    V+     +    I  +RI++P+  V +AL  SN+ + L V  QDL  +         WV++ +  +       +K +YI  GNE+ PG    Y   V PAM+N+   L    + + + VST   +  L ++YPP +  F  E  + +N I +F+     PL+ NVYPYF
Sbjct:   10 LAAALVLVGLLICSIQM-IGAQSIGVCYGKHANNLPSDQDVINLYNAN---GIRKMRIYNPDTNVFNALRGSNIEIILDVPLQDLQSLTDP-SRANGWVQDNIINHFPD----VKFKYIAVGNEVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGEFNSFINPIIQFLVQHNLPLLANVYPYF 209          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 67/212 (31.60%), Postives = 110/212 (51.89%), Query Frame = 3
Query:   42 MLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNE----IIPGTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGS-SYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            +   + L + S+      +G+N+G    +  PPA VV  L ++    I  V++F+ +  +L AL+ + + V +G+ N  LA +AGS+     WV + V+ +    NG + +RY+  GNE       GT     LPA++NIQ  + +  +   V V+  L+A    S S  PS+G F  E+   +  I KF+   GAP  IN+YP+ +L +DP
Sbjct:    9 VFFVITLLYASLLIEVEGIGVNWGSQARHPLPPATVVRLLREN---GIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSS-NG-VDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLNIVKFLSDNGAPFTINIYPFISLYNDP 215          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.604e-21
Identity = 57/194 (29.38%), Postives = 104/194 (53.61%), Query Frame = 3
Query:   93 TVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEA---VYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            ++G+NYG++G+NLP P  V+  +    +     V+++D  P++L A + + +   +G+ N+ L++M         W+++ VTP+    N T     IT GNEI+   ++     +LPAM+ +   L    + + + V+T  S + L SS+PPS G F  ++  +L  I +F     +P +IN YP+F    +P+
Sbjct:   28 SIGVNYGQIGDNLPSPTDVIPLIK---SIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSK-ALTWIKQNVTPFLPATNITC----ITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPK 213          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.048e-20
Identity = 61/220 (27.73%), Postives = 108/220 (49.09%), Query Frame = 3
Query:    3 YHIKMKTTMAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVT---PYTKGGNGTLKLRYITAGNEIIPGTEAVY---VLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYF 641
            Y    ++  A  ++L+ + + +  M      +G+ YG++ NNLP    V+     +    I  +RI++ +  +  +L  SN+ + L V NQDL  +A S      WV++ +    PY       +K +YI+ GNE+ P     Y   +L AM+N+   L    + + + V+T   +  L ++YPP +  F  E  + +N I +F+     PL+ N+YPYF
Sbjct:    5 YLFNKRSLGAAVLILVGLLMCNIQMTGAQSNIGVCYGKIANNLPSEQDVINLYKAN---GIRKMRIYNSDTNIFKSLNGSNIEIILDVPNQDLEALANS-SIANGWVQDNIRSHFPY-------VKFKYISIGNEVSPSNNGQYSQFLLHAMENVYNALAAAGLQDKIKVTTATYSGLLANTYPPKDSIFREEFKSFINPIIEFLARNNLPLLANIYPYF 213          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.048e-20
Identity = 65/188 (34.57%), Postives = 99/188 (52.66%), Query Frame = 3
Query:   87 AGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEII--PGTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYF 641
            A  +GI YGR  +NLP P RV E L + LN  I  VRI+D   +VL A A + + + +GV N DL   A        W+   + PY      + K+  I+ G E+   P      VLPAM+NI   L++  +   + +S+  S A L  S+PPS+ SF+ + +  L  + +F+    +P MI++YPY+
Sbjct:   24 ASKIGICYGRNADNLPSPNRVSE-LIQHLN--IKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYP----STKITSISVGLEVTEAPDNATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYY 204          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 67/213 (31.46%), Postives = 109/213 (51.17%), Query Frame = 3
Query:   39 VMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNE----IIPGTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYP-PSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            ++LLA+AL    +   A ++G N+G   ++  PP  VV  L ++    I  V++FD E + L AL  S + V +G+ N+ LA +A S+     WV + V+ +    N  + +RY+  GNE       G+      PA++NIQ  + +  + N V V+  L+A    SS   PS G F   +   +  I KF+   G P  +N+YPY +L ++P
Sbjct:    7 LLLLAVAL----LCQRASSIGANWGTQASHPLPPDIVVRMLREN---GIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDN--VNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNP 210          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 67/188 (35.64%), Postives = 101/188 (53.72%), Query Frame = 3
Query:   99 GINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAG-SMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASD 656
            G+ YG +G+NLP  + VV+ L K  N  I ++RI++P+ E L+AL  S + + L V   D  +  G    Y   WVR  V  Y       + +RYI  GNE+  G   + +L AM+N+   L   N+ + + VST +    + +S+PPS+G F     + L  I++F+ S GAP + NVYPYF    D
Sbjct:    6 GVCYGMVGDNLPSRSDVVQ-LYKSRN--IHAMRIYNPDQEALTALRGSGIFLILDVGGVDEVRRLGRDPSYAAGWVRSNVQAYYPD----VLIRYIAVGNEVPAGDTGIILL-AMQNVHNALASANLSSSIKVSTAVRFDVITNSFPPSSGVFRDP--SGLVPIARFLDSTGAPFLANVYPYFAYRDD 183          
The following BLAST results are available for this feature:
BLAST of CN181869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
E13D_TOBAC7.261e-2230.32Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13L_TOBAC1.618e-2130.41Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13B_WHEAT1.618e-2134.58Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E13G_TOBAC2.113e-2130.62Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E135_ARATH2.113e-2131.60Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E1311_ARATH3.604e-2129.38Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E13C_TOBAC1.048e-2027.73Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E1312_ARATH1.048e-2034.57Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E136_ARATH3.984e-2031.46Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13E_HORVU8.876e-2035.64Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181869 ID=CN181869; Name=CN181869; organism=Citrus sinensis; type=EST; length=664bp
GATACCATATCAAGATGAAGACCACAATGGCGATCAAGGTCATGCTGCTT
GCTATGGCTCTGTCTCACGATTCCATGGCATTCGGAGCTGGCACTGTTGG
CATCAATTATGGGAGACTTGGTAACAATCTCCCACCGCCAGCACGCGTAG
TCGAATTCCTGACGAAAGATCTTAATTATGCAATCCCATCGGTAAGGATA
TTTGATCCGGAACCCGAAGTCTTGAGTGCATTGGCCACATCAAACTTGAG
CGTATGCTTAGGGGTGAAAAATCAAGACCTTGCACAAATGGCCGGAAGCA
TGGACTACACACGAAATTGGGTTCGAGAATTTGTGACTCCATACACTAAA
GGCGGAAACGGAACCCTAAAACTCCGGTACATCACAGCCGGCAACGAGAT
TATCCCCGGCACCGAAGCCGTATATGTCCTGCCGGCCATGAAGAACATTC
AACAAGTACTAGAACAAGAAAATGTACCTAATGTCGGTGTATCAACTGTG
CTGTCAGCTGCTGCCCTAGGTTCCTCGTACCCACCATCAAACGGCTCATT
TGCTACTGAAGTGGCTACTACTTTGAATGAAATATCAAAATTTGTGTACT
CTAAAGGAGCTCCGTTGATGATCAATGTGTATCCTTATTTTACCCTAGCT
TCTGACCCTCAACA
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