CN181867

Overview
NameCN181867
Unique NameCN181867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.158e-39
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            ISI +C++ AAPDL A   S  T+LGRPWK YSR V+M +Y+ D +QP GWLEWNG   LDT+YYGEY N GPG+    RV+W GY ++  A EA  FTV  F  G +WLP T + F GGL
Sbjct:  496 ISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLA-EAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          

HSP 2 Score: 40.4318 bits (93), Expect = 1.158e-39
Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KPMA QKN ITA  R DPNQNTG
Sbjct:  473 KPMAKQKNAITAHGRLDPNQNTG 495          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.357e-39
Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = -2
Query:  240 KTLIRTRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLSV 632
            K + +    SI   ++ A  DL     +  TYLGRPWKLYSR V++   M D ++P GWLEWN DFALDTL+YGE+MN GPGS +  RV+WPGY V  ++ +A+ FTVSQFI G+ WLPSTGV F  GL +
Sbjct:  395 KDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGLYI 525          

HSP 2 Score: 31.187 bits (69), Expect = 4.357e-39
Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = -1
Query:  610 QKNTITAQNRKDPNQNTG 663
            QKNTITAQ RKD NQ +G
Sbjct:  385 QKNTITAQGRKDVNQPSG 402          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 1.633e-38
Identity = 65/121 (53.72%), Postives = 86/121 (71.07%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            ISIH+C++  A DL +S  ++ TYLGRPWK YSR V+M +Y+ + ++P GW EWNGDFAL TLYY EY N+G GS+   RV WPGY VI S T+A+ FTV  F+ G  W+  +GV ++ GL
Sbjct:  452 ISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          

HSP 2 Score: 35.8094 bits (81), Expect = 1.633e-38
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +PM  Q N ITAQ R DPNQNTG
Sbjct:  429 QPMQNQFNAITAQGRTDPNQNTG 451          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 2.129e-38
Identity = 67/120 (55.83%), Postives = 84/120 (70.00%), Query Frame = -2
Query:  246 SIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 605
            +IH C++  A DL  S  ++ TYLGRPWK YSR V M TY+   ++P GW  W+GDFAL TLYY EY N+GPGS   +RV WPGY VI +AT+AS FTV+ F+ G  W+  TGV F+GGL
Sbjct:  440 AIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          

HSP 2 Score: 33.4982 bits (75), Expect = 2.129e-38
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +P   Q N +TAQ R DPNQNTG
Sbjct:  416 QPRKGQSNEVTAQGRTDPNQNTG 438          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 7.996e-38
Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            I IH+  + AA DL+   GS  TYLGRPW+ YSR V+M T +   I PRGWLEW+G+FAL TL+Y E+ N+GPG++   RV WPG+RV+ SA+EASKFTV  F+ G SW+PS+ V F  GL
Sbjct:  392 IIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          

HSP 2 Score: 33.4982 bits (75), Expect = 7.996e-38
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  610 NTITAQNRKDPNQNTG 657
            NTITAQ R DPNQNTG
Sbjct:  376 NTITAQGRSDPNQNTG 391          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.040e-37
Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            I I  C + A  DL+  + S PTYLGRPWK YSR V M + + D IQP GW EWNG+FALDTL+YGEY N+G G+    RV+W G++VITS+TEA  +T  +FI G SWL STG  F  GL
Sbjct:  463 IVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          

HSP 2 Score: 35.8094 bits (81), Expect = 1.040e-37
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +P + QKN +TAQ R DPNQNTG
Sbjct:  440 RPGSGQKNMVTAQGRTDPNQNTG 462          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.041e-37
Identity = 65/101 (64.36%), Postives = 73/101 (72.28%), Query Frame = -2
Query:  243 PTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLS 545
            PTYLGRPWKLYSR VYM TYM   +QPRGWLEW G+FALDTL+YGEY N GPG     RV+WPGY ++   T A  FTV  FI G  WLP+TGV F  GL+
Sbjct:  443 PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGLA 542          

HSP 2 Score: 37.3502 bits (85), Expect = 1.041e-37
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = -1
Query:  610 PMAMQKNTITAQNRKDPNQNTG 675
            P+ +QK TITAQ RK PNQNTG
Sbjct:  409 PLPLQKVTITAQGRKSPNQNTG 430          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.042e-37
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            ISI    + AAP+ +A KG   +YLGRPWK YSR V++ T + + I PRGW EW+G +AL TLYYGE+MN+G G+  G RV WPG+ V+    EAS FTVS+FI G SW+P TGV F  G+
Sbjct:  399 ISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          

HSP 2 Score: 30.0314 bits (66), Expect = 1.042e-37
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +PM  Q N ITAQ R DP+ N+G
Sbjct:  376 RPMDHQGNMITAQGRDDPHTNSG 398          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.355e-37
Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            I I    + A  DL+  +GS PTYLGRPWK YSR V M + + D I P GW EW+G+FAL+TL+YGE+ NSG G+    RV+W G+RVITSATEA  FT   FI GSSWL STG  F  GL
Sbjct:  464 IVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          

HSP 2 Score: 37.3502 bits (85), Expect = 1.355e-37
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KP + QKN +TAQ R DPNQNTG
Sbjct:  441 KPNSGQKNMVTAQGRTDPNQNTG 463          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.995e-37
Identity = 66/117 (56.41%), Postives = 78/117 (66.67%), Query Frame = -2
Query:  258 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 608
            I I +C +    DL A KG+ PTYLGRPWK YSR V M + + D I+P GW EW+G FALDTL Y EY+N G G+   +RV+W GY+VITS TEA  FT  QFI G  WL STG  F
Sbjct:  467 IVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPF 583          

HSP 2 Score: 36.5798 bits (83), Expect = 2.995e-37
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +P + QKN +TAQ R DPNQNTG
Sbjct:  444 RPNSGQKNMVTAQGRSDPNQNTG 466          
The following BLAST results are available for this feature:
BLAST of CN181867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PME25_ARATH1.158e-3955.37Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME44_ARATH4.357e-3953.44Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME41_ARATH1.633e-3853.72Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME20_ARATH2.129e-3855.83Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME17_ARATH7.996e-3856.20Probable pectinesterase/pectinesterase inhibitor 1... [more]
PMEU1_SOLLC1.040e-3756.20Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME22_ARATH1.041e-3764.36Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME36_ARATH1.042e-3754.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_CITSI1.355e-3757.02Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME2_ARATH2.995e-3756.41Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181867 ID=CN181867; Name=CN181867; organism=Citrus sinensis; type=EST; length=678bp
TTTTTTTTTTTTTTTTTCTTTTAAGACCGTCACAAATATTATTACTTATC
ACAACATCAAGACGAAAAAAATGAAACCAGAAAATTATACAATTGCGAAA
GAAATATTTAGAATTTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGT
AAAATTCCATTTGATCCTTCCAACACTCATGAGACCCACCTATATATAAT
AAGTATACGTACTAAAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCC
CACCCAAGAAAGCCACCCCAGTCGACGGCAGCCACGACGACCCGTAGATA
AACTGCGACACAGTGAATTTACTTGCCTCCGTCGCCGACGTTATAACCCG
GTAACCCGGCCACCTCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGT
TCATGTACTCGCCGTAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCAT
TCAAGCCAGCCTCTGGGTTGGATGTGGTCACCCATGTACGTTAACATGTA
CACAACCCTCGAGTAGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGC
TGCCTTTCGAGGCCTGAAGATCGGGGGCGGCGTAAAGGCTGCAGTCGTGG
ATTGAGATGGCCCGTGTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGA
TGGTGTTCTTCTGCATGGCCATCGGCTT
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