CN181867

Overview
NameCN181867
Unique NameCN181867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.995e-37
Identity = 68/121 (56.20%), Postives = 82/121 (67.77%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            I I    + A  DL+  +GS PTYLGRPWK YSR V M + + D I P GW EW+G+FAL+TL+YGE+ N+G G+    RV+W G+RVITSATEA  FT   FI GSSWL STG  F  GL
Sbjct:  464 IVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          

HSP 2 Score: 37.3502 bits (85), Expect = 2.995e-37
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KP + QKN +TAQ R DPNQNTG
Sbjct:  441 KPNSGQKNMVTAQGRADPNQNTG 463          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.997e-37
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = -2
Query:  258 AISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 611
            AISI  C + A+ DL   KGS+ T+LGRPWKLYSR V M +++ +HI P GW  W+G+FAL TLYYGEY N+GPG+    RV W G++VI  + EA +FTV++ I G  WL  TGV F
Sbjct:  436 AISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          

HSP 2 Score: 31.187 bits (69), Expect = 2.997e-37
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = -1
Query:  613 PMAMQKNTITAQNRKDPNQNT 675
            P A QKN +TAQ R+D NQNT
Sbjct:  415 PGAGQKNMLTAQGREDQNQNT 435          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 3.901e-37
Identity = 66/121 (54.55%), Postives = 81/121 (66.94%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            I I  C + A  DLQ+ KGS PTYLGRPWK YS+ V M + + D I+P GW EW G FAL+TL Y EY N+G G+   +RV+W G++VIT+A EA K+T  QFI G  WL STG  F  GL
Sbjct:  472 IVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          

HSP 2 Score: 36.1946 bits (82), Expect = 3.901e-37
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +P + QKN +TAQ R DPNQNTG
Sbjct:  449 RPNSGQKNMVTAQGRTDPNQNTG 471          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.902e-37
Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = -2
Query:  246 SIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 605
            SI +C++  A DL +S  ++ TYLGRPWK YSR VYM +Y+   ++P GW EWNGDFAL TLYY EY N+GPGS   +RV WPGY VI S T+A+ FTV+     + W+  TGV +  GL
Sbjct:  459 SIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          

HSP 2 Score: 37.7354 bits (86), Expect = 3.902e-37
Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KPM  Q N ITAQ R DPNQNTG
Sbjct:  435 KPMPNQFNAITAQGRSDPNQNTG 457          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.123e-36
Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            ISI +C++ AAPDL A   S  T+LGRPWK YSR VY+ +Y+ D +QP GWLEWNG   LDT+ YGEY N GPG+    RV+W GY ++ +  +A  FTV  F  G +WLP T + F GGL
Sbjct:  501 ISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          

HSP 2 Score: 37.7354 bits (86), Expect = 1.123e-36
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KPMA QKN +TA  R DPNQ TG
Sbjct:  478 KPMANQKNAVTAHGRTDPNQKTG 500          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.248e-36
Identity = 66/115 (57.39%), Postives = 76/115 (66.09%), Query Frame = -2
Query:  264 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGV 608
            ISI +C + AA DL     S  TYLGRPWK YSR V++L+ M   I P GWLEW+GDFAL TLYY EY N+GPGS    RV WPGY V T+ TE  +FTV  FI GS WL S  +
Sbjct:  200 ISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNI 314          

HSP 2 Score: 35.8094 bits (81), Expect = 4.248e-36
Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KP   QKN  TAQ R DPNQNTG
Sbjct:  177 KPNENQKNIFTAQGRDDPNQNTG 199          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.975e-35
Identity = 65/121 (53.72%), Postives = 78/121 (64.46%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            I I    + A  DLQ  + S PTYLGRPWK YSR V M + + + I P GW  W+G+FALDTLYYGEY N+G G+A   RV W G++VITS+TEA  FT   FI G SWL +T   F  GL
Sbjct:  199 IVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          

HSP 2 Score: 35.8094 bits (81), Expect = 5.975e-35
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +P + QKN +TAQ R DPNQNTG
Sbjct:  176 RPGSGQKNMVTAQGRTDPNQNTG 198          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.400e-34
Identity = 67/121 (55.37%), Postives = 78/121 (64.46%), Query Frame = -2
Query:  246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608
            ISIH+C +          GS  TYLGRPWK YSR V M +++   I P GW  W+ +FAL TLYYGE+ NSGPGS+V  RV W GY    + TEA  FTVS FI G+SWLPSTGV F  GL
Sbjct:  417 ISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          

HSP 2 Score: 30.8018 bits (68), Expect = 6.400e-34
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = -1
Query:  610 KNTITAQNRKDPNQNTG 660
            +N +TAQ R DPNQNTG
Sbjct:  400 QNYVTAQGRSDPNQNTG 416          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.840e-33
Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = -2
Query:  258 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 608
            ISIH+C++    +L      I T+LGRPWK +S  V M ++M   I P+GWL W GD A DT++Y EY+NSGPG++  +RV+W G +   +  EA+KFTV  FI G++WLP+T V F
Sbjct:  448 ISIHNCTIKPLDNLT----DIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPF 560          

HSP 2 Score: 41.5874 bits (96), Expect = 1.840e-33
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            +PM  Q+NTITAQ RKDPNQNTG
Sbjct:  425 RPMKGQQNTITAQGRKDPNQNTG 447          
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.840e-33
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = -2
Query:  246 TYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 542
            TYLGRPW+ +SR V+M   +G  + P GWL W+G FAL TLYYGEY N+G G++V  RV+WPGY VI + TEA KFTV  F+ G+ W+ +TGV    GL
Sbjct:  456 TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          

HSP 2 Score: 38.5058 bits (88), Expect = 1.840e-33
Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = -1
Query:  610 KPMAMQKNTITAQNRKDPNQNTG 678
            KPM+ QKNTITAQ+RK+P++ TG
Sbjct:  420 KPMSGQKNTITAQSRKEPDETTG 442          
The following BLAST results are available for this feature:
BLAST of CN181867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PME3_CITSI2.995e-3756.20Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME18_ARATH2.997e-3754.24Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME3_ARATH3.901e-3754.55Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME7_ARATH3.902e-3753.33Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME47_ARATH1.123e-3652.89Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_ACTDE4.248e-3657.39Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME_DAUCA5.975e-3553.72Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME35_ARATH6.400e-3455.37Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME46_ARATH1.840e-3347.86Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME6_ARATH1.840e-3355.56Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181867 ID=CN181867; Name=CN181867; organism=Citrus sinensis; type=EST; length=678bp
TTTTTTTTTTTTTTTTTCTTTTAAGACCGTCACAAATATTATTACTTATC
ACAACATCAAGACGAAAAAAATGAAACCAGAAAATTATACAATTGCGAAA
GAAATATTTAGAATTTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGT
AAAATTCCATTTGATCCTTCCAACACTCATGAGACCCACCTATATATAAT
AAGTATACGTACTAAAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCC
CACCCAAGAAAGCCACCCCAGTCGACGGCAGCCACGACGACCCGTAGATA
AACTGCGACACAGTGAATTTACTTGCCTCCGTCGCCGACGTTATAACCCG
GTAACCCGGCCACCTCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGT
TCATGTACTCGCCGTAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCAT
TCAAGCCAGCCTCTGGGTTGGATGTGGTCACCCATGTACGTTAACATGTA
CACAACCCTCGAGTAGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGC
TGCCTTTCGAGGCCTGAAGATCGGGGGCGGCGTAAAGGCTGCAGTCGTGG
ATTGAGATGGCCCGTGTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGA
TGGTGTTCTTCTGCATGGCCATCGGCTT
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