CN181867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.682e-27 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 264 RTRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGV 620 ++ +SI C++ A ++ A PTYLGRPWK +S V M T +G ++P GW+ W +G ++ YGEY N+GPGS V RV+W GY+ + S EA+KFTV+ ++G+ W+P+TGV Sbjct: 467 QSSGMSIQRCTISANGNVIA-----PTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581 HSP 2 Score: 35.039 bits (79), Expect = 1.682e-27 Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 +P++ Q NTITAQ +KDPNQ++G Sbjct: 448 QPLSNQFNTITAQGKKDPNQSSG 470
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.684e-27 Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = -2 Query: 246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608 IS+ +CS+ A+ DL S + +YLGRPW+ +SR V M +Y+ + I GW +WNG ALDTLYYGEY N+GPGS RV WPG+ ++ +A FT ++FI G WL ST + G+ Sbjct: 428 ISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547 HSP 2 Score: 22.3274 bits (46), Expect = 1.684e-27 Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = -1 Query: 610 PMAMQKNTITAQNRKDPNQNTG 675 PM Q ITAQ+R +++TG Sbjct: 406 PMPGQFTVITAQSRDTQDEDTG 427
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.712e-27 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = -2 Query: 252 IHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLG 602 + +C + P K YLGRPWK +SR + M T + D I P GWL WNGDFAL+TLYY EY N+GPGS RV+WPG + + S +A +FT ++F+ G+ W+P V ++G Sbjct: 453 LQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPYMG 568 HSP 2 Score: 26.9498 bits (58), Expect = 3.712e-27 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 KPM Q ITAQ R D ++TG Sbjct: 428 KPMKSQSCMITAQGRSDKRESTG 450
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.934e-25 Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = -2 Query: 267 RTRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTG 620 +T IH+C++ DL+ K +YLGRPWK +SR V M + + D I P GWL W DFA+DTL Y EY N GP A RV+WPG+RV+ + EA KFTV F+ G W+ + G Sbjct: 483 QTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQG-EWIQAIG 599 HSP 2 Score: 27.7202 bits (60), Expect = 1.934e-25 Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 K + QKNT+TAQ R D Q TG Sbjct: 464 KGLPGQKNTVTAQGRVDKFQTTG 486
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.306e-25 Identity = 47/120 (39.17%), Postives = 77/120 (64.17%), Query Frame = -2 Query: 246 SIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 605 +I C++ A+ DL + ++ TYLGRPW+++S V M +++GD + P GW W G+ L TL+Y EY N GPG+ RV+W G++V+ +A++FTV++ + G +WL T + + GL Sbjct: 407 TIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.623e-25 Identity = 46/120 (38.33%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 246 SIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 605 SI +C++ A+ DL + ++ TYLGRPW+++S V + +++GD + P GW W G+ L TL+Y EY N GPG+ RV+W G++V+ +A++FTV++ + G +WL + + + GL Sbjct: 407 SIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 5.623e-25 Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = -2 Query: 258 GKTLIR-TRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 635 G++ +R + + +H C + P K YLGRPWK +SR + M T + D I P GWL W+GDFAL TLYY E+MN+GPGS RV+WPG + +T +A +T +F+ G +W+P T V + Sbjct: 439 GRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPY 564
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 9.326e-25 Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = -2 Query: 276 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALD--TLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYG-SSWLP 608 ISIH C++ ++ A+ TYLGRPWKL+S+ V M + +G + P GW+ WN + T++Y EY NSGPGS + RV+W GY+ I+S EA++FTV F+ G +W+P Sbjct: 851 ISIHQCTISPNGNVTAT-----TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWIP 959 HSP 2 Score: 29.261 bits (64), Expect = 9.326e-25 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 +P+ Q NTITA+ ++ NQNTG Sbjct: 828 QPLPNQFNTITAEGTQEANQNTG 850
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.072e-24 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = -2 Query: 258 PTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDT-LYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 545 PTYLGRPWK +S V M + +G + P GW+ W + T ++Y EY NSGPG+ V RV+W GY+ + A +FTV FI G WLP+ V F Sbjct: 481 PTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577 HSP 2 Score: 37.7354 bits (86), Expect = 2.072e-24 Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 +P+ Q NTITAQ +KDPNQNTG Sbjct: 441 QPLPNQFNTITAQGKKDPNQNTG 463
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.120e-24 Identity = 45/120 (37.50%), Postives = 76/120 (63.33%), Query Frame = -2 Query: 246 SIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 605 SI +C++ + DL + ++ TYLGRPW+ +S V + +++GD + P GW W G+ L TL+Y EY N GPG+ RV+W G++V+ +A++FTV++ + G +WL + + + GL Sbjct: 380 SIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497 The following BLAST results are available for this feature:
BLAST of CN181867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181867 ID=CN181867; Name=CN181867; organism=Citrus sinensis; type=EST; length=678bpback to top |