CN181867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.005e-23 Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = -2 Query: 267 RTRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTG 620 +T +H+C + A DL+ K +YLGRPWK YSR + M + + + I P GWL W DFA+DTLYY EY N G RV+WPG++VI + EA +TV F+ G W+ ++G Sbjct: 488 QTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFLQG-DWISASG 604 HSP 2 Score: 27.7202 bits (60), Expect = 1.005e-23 Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 K + QKNT+TAQ R D Q TG Sbjct: 469 KGLPGQKNTVTAQGRVDKFQTTG 491
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.072e-22 Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = -2 Query: 258 TRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 617 T I IH+ + K +LGRPWK +SR + M T + D I P GWL+WN FAL+TL+Y EY N G GS G RVRW G + I S A +F F+ G++W+P T + + Sbjct: 580 TTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRI-SDRAAREFAPGNFLRGNTWIPQTRIPY 698 HSP 2 Score: 26.5646 bits (57), Expect = 1.072e-22 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = -1 Query: 610 KPMAMQKNTITAQNRKDPNQNTG 678 +PM Q+ +TAQ RKD + TG Sbjct: 560 RPMEHQQCIVTAQGRKDRRETTG 582
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19 Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = -2 Query: 246 IRTRAISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWN-GDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYG-SSWLPSTGVAFLGGL 623 I+ AI + +C + D + TYLGRPWK YSR + M +Y+ I+P GW WN +F DT YY EY N GPG+A+ R+ W G++ + A KFT +I +WL V + G+ Sbjct: 244 IQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.136e-17 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = -2 Query: 246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608 I +H+C + +L+A K +I +YLGRPWK ++ V + T +GD I+P GW EW G+ T Y E+ N GPG+A R W +V SA E +TV+ ++ ++W+ V GL Sbjct: 470 IVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.913e-17 Identity = 42/101 (41.58%), Postives = 55/101 (54.46%), Query Frame = -2 Query: 270 DLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPST 572 + QA+ +LGRPWK +SR V++ + I P GW+ WNGDFAL TLYYGEY N+GPGS RV W ++V+ FI W +T Sbjct: 504 EFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSSE---IPEKHVDVYSVANFIQADEWASTT 601 HSP 2 Score: 21.557 bits (44), Expect = 1.913e-17 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = -1 Query: 610 NTITAQNRKDPNQNTG 657 N ITA R D +Q+TG Sbjct: 472 NAITAHGRIDASQSTG 487
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.937e-17 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = -2 Query: 246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608 I +H+C + A +L+A + ++ +YLGRPWK ++ + T +GD IQP GW EW G+ T Y E+ N GPG+ RV W ++ SA E +FTV+ ++ ++W+ V GL Sbjct: 466 IVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = -2 Query: 246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608 I +H+C + A +L+A + ++ +YLGRPWK ++ + T +GD IQP GW EW G+ T Y E+ N GPG+ RV W ++ SA E +FTV+ ++ ++W+ V GL Sbjct: 453 IVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.211e-17 Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = -2 Query: 282 YLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSW 539 +LGRPWK YSR V++ + I P GWL W+GDFAL TLYYGE N+GPGS RV W ++V+ FI W Sbjct: 464 FLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSSQ---IPDEHVHVYSVANFIQADEW 546 HSP 2 Score: 29.261 bits (64), Expect = 4.211e-17 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = -1 Query: 610 PMAMQKNTITAQNRKDPNQNTG 675 P +KN +TAQ R DP+Q+TG Sbjct: 415 PEKGEKNAVTAQGRIDPSQSTG 436
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = -2 Query: 246 ISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 608 I + +C + L + ++ TYLGRPWK +S V M T MGD I+P GW W+G+ + Y EY N GPG+ RV W +V SA E + FT + ++ +W+ V GL Sbjct: 470 IVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588
BLAST of CN181867 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = -2 Query: 309 SIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW--NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTV 605 ++H C + DL K +YLGRPW+ YSR + M +Y+ D I GW W +GD L TLY+GE+ N GP + + RV W G+ I EA+ F+V Sbjct: 390 ALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI-GFEEANYFSV 489 The following BLAST results are available for this feature:
BLAST of CN181867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181867 ID=CN181867; Name=CN181867; organism=Citrus sinensis; type=EST; length=678bpback to top |