CN181865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40 Identity = 79/127 (62.20%), Postives = 100/127 (78.74%), Query Frame = -3 Query: 302 DHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 682 D+ K +LEL +K++ R++IF+ID G P E+YDDFTASLP ++CRYAV+DFDF T+ENCQKSKIFFIAWSPD SR+R KM+YA+SKDRF+RELDGI E+QATDPSEM ++I+ RA Sbjct: 2 DNCKLKFLEL-KKRIFRFIIFRIDGQQVVVEKL--GNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 125
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.162e-40 Identity = 74/130 (56.92%), Postives = 98/130 (75.38%), Query Frame = -3 Query: 299 VADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 688 + D K +++E++ KKVHRYV++K++ K G ESYDD ASLP++DCRYAV+DFD+VT +NC+ SKIFFI WSP+ SRIR KM+YATSK RR LDG+HYE+QATDP+EM + I+DRA+ Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRAK 130
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.804e-40 Identity = 76/132 (57.58%), Postives = 99/132 (75.00%), Query Frame = -3 Query: 305 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 700 +GM V D K ++EL+ K+ R +++KI+ G P +SYDDF ASLP +DCRY +YDFDFVT+ENCQKSKIFFIAWSPD +++R KM+YA+SKDRF+RELDGI E+QATDP+EM L+V + R Sbjct: 6 SGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKL--GEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSR 135
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.804e-40 Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = -3 Query: 305 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 700 +G+ V D K + EL+ ++ R+++F+ID + G P + Y DFT SLP N+CRYA+YD DF T ENCQKSKIFF +WSPD +R R+KMLYA+SKDRFRRELDGI EIQATDPSEM L+++R R Sbjct: 6 SGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSR 137
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39 Identity = 81/129 (62.79%), Postives = 98/129 (75.97%), Query Frame = -3 Query: 302 VADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 688 V + SKS + EL R+KVHRYVIFKID KTG P ESYDDFTASLP + AVYD DFV+ +NC+KSKIFFI+WSP +S IRAK +YA +++FR ELDG+H+EIQATDP +MDLEV+R RA Sbjct: 19 VPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRA 143
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39 Identity = 71/133 (53.38%), Postives = 102/133 (76.69%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GM V D K ++EL+ K+ HR++I+KI+ K G P ++++D ASLP ++CRYA++DFDFV+SE +S+IFF+AWSPD +R+R+KM+YA+SKDRF+RELDGI E+QATDP+EMDL+V + RA Sbjct: 6 SGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRA 138
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.271e-38 Identity = 72/132 (54.55%), Postives = 97/132 (73.48%), Query Frame = -3 Query: 305 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 700 +G+ V+D K + +L+ ++ R+++F+ID + G P + Y DFT SLP ++CRYA+YD DF T ENCQKSKIFF +WSPD +R R+KMLYA+SKDRFRRELDGI EIQATDPSEM L++++ R Sbjct: 6 SGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSR 137
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.007e-35 Identity = 69/135 (51.11%), Postives = 98/135 (72.59%), Query Frame = -3 Query: 299 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 703 ++G+ V D + ELQ K++HR++ FK+D + G A SYDDFT SLP+NDCRYA+YDFDFVT+E+ QKS+IF+I WSP +++++KMLYA+S +F+ L+GI E+QATD SE+ L+ I+DRAR Sbjct: 5 RSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRAR 139
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.527e-34 Identity = 63/134 (47.01%), Postives = 97/134 (72.39%), Query Frame = -3 Query: 299 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 700 +G+ + D K + ELQ K++HR++ F +D K G SY+DFT+SLP+ DCR+A+YDFDF+T+E+ KS+IF+I WSPD +++R+KMLYA+S +RF++EL+GI E+QATD E+ L+ ++DR + Sbjct: 6 SGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDRVK 139
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28 Identity = 58/142 (40.85%), Postives = 91/142 (64.08%), Query Frame = -3 Query: 308 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSE-----------NCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRD 700 +G+ V++ K+ + EL+ + HR+V+FKID + G +D+ TASLP + CRYAVYD DF S+ +SKIFF++WSP + +R+KM+YA+S + F++ELDG+ ++QATDPSE+ L+V++D Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKD 147 The following BLAST results are available for this feature:
BLAST of CN181865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181865 ID=CN181865; Name=CN181865; organism=Citrus sinensis; type=EST; length=708bpback to top |