CN181865

Overview
NameCN181865
Unique NameCN181865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ACTP_ACACA (Actophorin OS=Acanthamoeba castellanii PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 51/134 (38.06%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  299 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 700
            +G+ V+D     + EL+    HRYV FK++           GGP  +Y+DF + LP+ DCRYA++D++F   +  Q++KI FI W+PD + I++KM+Y ++KD  +++L GI  E+QATD +E+  + + +RA+
Sbjct:    2 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQV-DGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK 134          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_YARLI (Cofilin OS=Yarrowia lipolytica GN=COF1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23
Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDF-VTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ V D +   + EL+  K   ++I+KI+         + G   +SYD F   LP+NDCRYAVYDF++ ++S   ++SK+ F  WSPD + +R+KM+YA+SKD  RR L GI  EIQ TD SE+  E + +R
Sbjct:   13 RSGVAVNDSALQAFNELKLGKKVTFIIYKINDAKTEIVVEEEG-TTDSYDTFLGKLPENDCRYAVYDFEYEISSGEGKRSKLVFFTWSPDTAPVRSKMIYASSKDSLRRALTGISTEIQGTDFSEVAYESVLER 145          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_ZYGRO (Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 53/134 (39.55%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSEN-CQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ VAD S   + +L+  K +++V++ I          +T   ++SYD+F   LP+NDC YA+YDF++    N  ++SKI F  WSPD + +R+KM+YA+SKD  RR L G+  +IQ TD SE+  E + +R
Sbjct:    3 RSGVSVADESLQAFNDLKLGKKYKFVLYGISEDKTTIVVKETS-TSQSYDEFLGKLPENDCLYAIYDFEYEIGGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALTGVSSDIQGTDFSEVSFETVLER 135          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 55/135 (40.74%), Postives = 83/135 (61.48%), Query Frame = -3
Query:  305 MGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKT-----GGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 694
            M + D  K T+LEL+ ++  R +++KI+                G   +SY++F  SLP ++CRYA+ D +FV  E     KI FIAWSP  +++R KM+Y+++KDRF+RELDGI  E  ATD +++ L+ IR R
Sbjct:    1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRR 131          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_DEBHA (Cofilin OS=Debaryomyces hansenii GN=COF1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 50/134 (37.31%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDF-VTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ VAD S + + +L+  K ++++IF ++         +T   ++ YD F   LP+N+C+YA+YDF++ +     ++SKI F  WSPD + I++KM+YA+SKD  RR L+G+  ++Q TD SE+  E + DR
Sbjct:    3 RSGVAVADESLTAFNDLKLGKKYKFIIFALNDQKTEIVVEETSNNSD-YDAFLEKLPENECKYAIYDFEYEIGGGEGKRSKIVFFTWSPDTAPIKSKMIYASSKDALRRALNGVSSDVQGTDFSEVAYESVLDR 135          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_CANGA (Cofilin OS=Candida glabrata GN=COF1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 53/134 (39.55%), Postives = 83/134 (61.94%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSEN-CQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ VAD S   + +L+    +++V+F ++         +T     SYD F   LP+NDC YAVYDF++  SE+  ++SKI F  WSPD + +R KM+YA+SKD  +R L+G+  EIQ TD SE+  E + ++
Sbjct:    3 RSGVAVADESIQAFNDLKLGMKYKFVLFSLNDAKTEIVVKETSSDP-SYDAFLEKLPENDCLYAVYDFEYQISESEGKRSKIVFFTWSPDTASVRPKMVYASSKDALKRALNGVAIEIQGTDFSEVSYEAVLEK 135          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_YEAST (Cofilin OS=Saccharomyces cerevisiae GN=COF1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21
Identity = 49/134 (36.57%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDF-VTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ VAD S + + +L+  K +++++F ++         +T     SYD F   LP+NDC YA+YDF++ +     ++SKI F  WSPD + +R+KM+YA+SKD  RR L+G+  ++Q TD SE+  + + +R
Sbjct:    3 RSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETSTDP-SYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLER 135          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_PICAN (Cofilin OS=Pichia angusta GN=COF1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21
Identity = 52/134 (38.81%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSE-NCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ V+D +   + +L+  K  + +I+K++          T    ++YD F   LP+NDCRYAVYDF++   + + +++KI F  WSPD + +RAKM+YA+SKD  RR L+GI  EIQ TD SE+  E + ++
Sbjct:    3 RSGVAVSDEALKAFNDLKLGKKFKSIIYKLNDAKTEIVVDSTS-TEDAYDAFVEDLPENDCRYAVYDFEYEVGQGDGKRNKIVFYQWSPDTASVRAKMVYASSKDALRRALNGIGTEIQGTDFSEVAYESVLEK 135          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_KLULA (Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21
Identity = 50/134 (37.31%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSEN-CQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ VAD S + + +L+  K ++++++ ++         +T    + YD F   LP+NDC YAVYDF++    N  ++SKI F  WSPD + +R+KM+YA+SKD  RR L+G+  +IQ TD SE+  E + ++
Sbjct:    3 RSGVAVADESLNAFNDLKLGKKYKFILYALNDSKTEIIVKETSAE-QDYDKFLEQLPENDCLYAVYDFEYELGNNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSSDIQGTDFSEVAYESVLEK 135          
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: COFI_ASHGO (Cofilin OS=Ashbya gossypii GN=COF1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21
Identity = 51/134 (38.06%), Postives = 85/134 (63.43%), Query Frame = -3
Query:  305 KTGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDF-VTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 703
            ++G+ VAD S + + +L+  K +++V+F ++         +T    + YD F   LP++DC YAVYDF++ ++    ++SKI F  WSPD + IR+KM+YA+SKD  RR L+G+  +IQ TD SE+  E + ++
Sbjct:    3 RSGVAVADESLTAFNDLKLGKKYKFVLFGLNADKTSIIVKETSNERD-YDVFLEKLPEDDCLYAVYDFEYEISGAEGKRSKIVFFTWSPDTAPIRSKMVYASSKDALRRALNGVSSDIQGTDFSEVAYESVLEK 135          
The following BLAST results are available for this feature:
BLAST of CN181865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
ACTP_ACACA2.328e-2438.06Actophorin OS=Acanthamoeba castellanii PE=1 SV=2[more]
COFI_YARLI4.390e-2341.79Cofilin OS=Yarrowia lipolytica GN=COF1 PE=3 SV=1[more]
COFI_ZYGRO5.733e-2339.55Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 S... [more]
ADF11_ARATH1.277e-2240.74Putative actin-depolymerizing factor 11 OS=Arabido... [more]
COFI_DEBHA4.854e-2237.31Cofilin OS=Debaryomyces hansenii GN=COF1 PE=3 SV=1[more]
COFI_CANGA4.854e-2239.55Cofilin OS=Candida glabrata GN=COF1 PE=3 SV=1[more]
COFI_YEAST1.412e-2136.57Cofilin OS=Saccharomyces cerevisiae GN=COF1 PE=1 S... [more]
COFI_PICAN1.412e-2138.81Cofilin OS=Pichia angusta GN=COF1 PE=2 SV=1[more]
COFI_KLULA1.412e-2137.31Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1[more]
COFI_ASHGO4.109e-2138.06Cofilin OS=Ashbya gossypii GN=COF1 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J13_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181865 ID=CN181865; Name=CN181865; organism=Citrus sinensis; type=EST; length=708bp
CCCTTTTTTTTTCTATTAGAATACCCATTTCATTAAGCAAAGTCGAACAG
CATAAGTATCCATGTCTATGTCCAATTTTACCTGAGAAGCATCATGGCAA
TAGAGAGCCCGTGTCCTCTGGCATCGCAGTGCCTCAGCCATGAGCTCGTT
ATCAGCCTTCTCAGGTGCTGATTATTTAACAATAGCTATATGTACTATGT
GCCACACAAATACGGCAACTAATTGGAGGACAGTTTGTGCCTTCAGACCA
CAAATGCAGTCTCAAGGAAACAAATTCTTTTCCTTCAGGGCATTCTCAGC
GTGCACGGTCTCTGATCACCTCAAGATCCATCTCACTTGGGTCAGTTGCC
TGAATTTCATAGTGGATGCCGTCCAGCTCCCTCCTGAACCTGTCCTTTGA
TGTTGCATACAGCATCTTAGCTCGGATTCGGGACACGTCAGGAGACCATG
CAATGAAAAAGATCTTGCTTTTCTGACAATTCTCTGAGGTCACAAAATCA
AAGTCATAAACTGCATAACGACAGTCATTATCCGGCAAAGATGCAGTGAA
ATCGTCATAGCTCTCAGCTGGGCCTCCAGTCTTTTCAACCACTACCTCCT
TTTTCTTCTCATCAATCTTAAAAATCACATACCGATGTACTTTCTTCCTC
TGCAACTCTAGGTATGTGCTCTTGCTGTGATCAGCAACTCCCATTCCAGT
TTTTTTTT
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