CN188762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 162 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS--QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 551 Q ++GH+D VHDV DFYG+ +AT SSD IK+ L S + + + H + + WA P++G I+AS SYD V +W+E + W + T ND K S+ S+ +AP LGL LAC +DG + ++ A Sbjct: 2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 139
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEH1_SCHPO (Nucleoporin seh1 OS=Schizosaccharomyces pombe GN=seh1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18 Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 3 Query: 159 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG--PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN----DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG 563 A I+T H+D V+DV DFYG+R+ + S+D +K+ ++ T + G + +VAWAHP FG +LA CS D V I++E +N W + D +S+V I++ P + G LA S+D + ++ A G Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPG 146
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_AEDAE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSW 623 + GH T+ DVA G+ LA+AS D+++ I + + ATL+GH V V+W+ K GS+LA+CS D V +W+ ++++ A N H V + W PHE LA S D I ++ AD W + +H V S+S+ Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS--KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHE--DILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISF 203
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_CULQU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Culex quinquefasciatus GN=Ciao1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 50/158 (31.65%), Postives = 80/158 (50.63%), Query Frame = 3 Query: 153 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSW 623 +P + GH T+ DVA G+ LA+AS D+++ I + + ATL+GH V V+W+ K G++LA+CS D V IW+ ++++ A N H V + W P+E LA S D I ++ AD W + +H V S+++ Sbjct: 50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNE--DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAF 203
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14 Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSW 623 + GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+ K G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F +A D WD T +H V S+ + Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDF 202
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSVSW 623 + GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F + D WD T +H V S+ + Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW--HPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF 202
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSVSW 623 + GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F + D WD T +H V S+ + Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW--HPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF 202
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_DROAN (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSW 623 + GH+ T+ ++ G+ LA+AS D + I S+ + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W P EL LA S D I +F A D WD +H V S+ + Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEL---LASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDF 202 HSP 2 Score: 70.8626 bits (172), Expect = 7.385e-12 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 300 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 626 TL+GH+G +W VAW HPK G++ ASC D + IW N N WT +D HK ++ I W+P G LA S DG ++++ ++ G ++ + H V SVSW+ Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-NGNTWTTKTILSDGHKRTIREIRWSP--CGQYLASASFDGTTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 51/156 (32.69%), Postives = 75/156 (48.08%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 632 ++ GH+ TV VA G LA+AS D++ I N + L L+GH V VAWA G++LA+CS D V IW+ +N++ N H V + W P EL LA S D N+ V+ D W+ + H V +++ P+ Sbjct: 56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQEL---LASCSYDNNVCVY-KEEDDDWECRATLEGHTSTVWGLTFDPS 205
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSW 623 + GH+ T+ +V G+ LA+AS D++ I S + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F +A D WD T +H V S+ + Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVW--HPTKEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDF 198 The following BLAST results are available for this feature:
BLAST of CN188762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188762 ID=CN188762; Name=CN188762; organism=Citrus sinensis; type=EST; length=691bpback to top |