CN181856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 57/131 (43.51%), Postives = 71/131 (54.20%), Query Frame = 2 Query: 380 SESCRAETRSFLRGIDVNRLPSHA-------DNEEEXXXXXXXXXXXXXXGKRSEREPNGDELE---------------MERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 SE+ R+E + RG DVNR PS A D+EE G + +G L ER+ SR SDD++G ++RKKLRLSK+QSA LEESFKEH+TLNPKQK+ALAK Sbjct: 79 SETGRSEAAA--RGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGHGLRGHAEAAAQGGGGGGGGERSSSRA-SDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAK 206
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 2 Query: 521 EREPNGDEL--EMERACSRGISDDEDGD--TSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 ER N ++ E+ER+ SR ++D D + ++RKKLRLSKDQSA LE+SFKEH+TLNPKQK+ALAK Sbjct: 157 ERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAK 222
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 542 ELEMERAC---SRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 E E ERA S +DD++G SRKKLRLSK+QSA+LE+ FKEH+TLNPKQK+ALAK Sbjct: 69 EYEYERALYSSSAAAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAK 126
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 542 ELEMERAC---SRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 E E ERA S +DD++G SRKKLRLSK+QSA+LE+ FKEH+TLNPKQK+ALAK Sbjct: 69 EYEYERALYSSSAAAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAK 126
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 515 RSEREPNGDELEMERACSRGISD---DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 + ER+ + E E R ISD DE+G ++RKKLRL+K QSA+LEESFK+H+TLNPKQK LA+ Sbjct: 79 KRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLAR 145
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 542 ELEMERACSRGISDDE--DGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALA 703 E E+ER+ S G+ DD+ DG RKKLRLSKDQ+A+LEE FK H+TLNPKQK+ALA Sbjct: 92 ERELERSGS-GVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALA 146
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 542 ELEMERACSRGISDDE--DGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALA 703 E E+ER+ S G+ DD+ DG RKKLRLSKDQ+A+LEE FK H+TLNPKQK+ALA Sbjct: 92 ERELERSGS-GVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALA 146
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 524 REPNGDELEMERACSR--GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 + +E + ER S G DD+DG T RKKLRL+K+QSA+LE+ F+EH+TLNPKQK+ALAK Sbjct: 98 KRERAEEADGERVSSTAAGRDDDDDGST-RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAK 159
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 524 REPNGDELEMERACSR--GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 + +E + ER S G DD+DG T RKKLRL+K+QSA+LE+ F+EH+TLNPKQK+ALAK Sbjct: 98 KRERAEEADGERVSSTAAGRDDDDDGST-RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAK 159
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 548 EMERACSRGI--SDDEDG----DTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 E ERA RG SD+EDG D SRKKLRLSKDQSA+LE+SF+EH TLNP+QK LA+ Sbjct: 56 EEERAGLRGGGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQ 114 The following BLAST results are available for this feature:
BLAST of CN181856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181856 ID=CN181856; Name=CN181856; organism=Citrus sinensis; type=EST; length=706bpback to top |