CN181847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.983e-81 Identity = 109/133 (81.95%), Postives = 121/133 (90.98%), Query Frame = -3 Query: 152 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA+EALRRAKFKFPGRQKII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG HG LA+R PG+AFL T Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAET 219 HSP 2 Score: 97.8265 bits (242), Expect = 3.983e-81 Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFH Sbjct: 39 KKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 3.983e-81 Identity = 109/133 (81.95%), Postives = 121/133 (90.98%), Query Frame = -3 Query: 152 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA+EALRRAKFKFPGRQKII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG HG LA+R PG+AFL T Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAET 219 HSP 2 Score: 97.8265 bits (242), Expect = 3.983e-81 Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFH Sbjct: 39 KKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.056e-66 Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N++HAQEALRRAKFKFP RQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLGCHG LA RQPGRAFLEA Sbjct: 16 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEA 147
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_DROME (60S ribosomal protein L10 OS=Drosophila melanogaster GN=Qm PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 3.836e-57 Identity = 82/121 (67.77%), Postives = 94/121 (77.69%), Query Frame = -3 Query: 188 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLA 550 +R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR D EALRRAKFKFPGRQKI VS+KWGFTK+ R Y + +NR+ PDG N K HGP+A Sbjct: 87 IRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIA 207 HSP 2 Score: 72.4034 bits (176), Expect = 3.836e-57 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK V++FP CVHLVS E E +SSEALEA RI CNKY+ KY GKD FH Sbjct: 39 KKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_DICDI (60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 6.521e-57 Identity = 78/122 (63.93%), Postives = 99/122 (81.15%), Query Frame = -3 Query: 185 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQ 550 +RVRVHP+HVLRINKMLSCAGADRLQTGMRGAFGKP GT ARV IGQ++ S+R +D+ + EALRR+ +KFPGRQKI+VS+KWGFT ++R Y + K++ R++ DG N K++ HG LAQ Sbjct: 87 MRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVITNHGTLAQ 208 HSP 2 Score: 74.3294 bits (181), Expect = 6.521e-57 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK DEFP CVHL+S EKE +SSEA+EA RI+CNKY++K GKD+FH Sbjct: 39 KKASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.203e-56 Identity = 81/120 (67.50%), Postives = 97/120 (80.83%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ ++ R++PDG K + HGPL Sbjct: 87 MRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKRLIPDGCGVKYVPSHGPL 206 HSP 2 Score: 66.6254 bits (161), Expect = 3.203e-56 Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP C H+VS E E +SSEALEAARI NKYM K G+D FH Sbjct: 39 KKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SHEEP (60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.203e-56 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ +E R++PDG K + GPL Sbjct: 87 IRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206 HSP 2 Score: 67.781 bits (164), Expect = 3.203e-56 Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH Sbjct: 39 KKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_PIG (60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 3.203e-56 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ +E R++PDG K + GPL Sbjct: 87 IRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206 HSP 2 Score: 67.781 bits (164), Expect = 3.203e-56 Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH Sbjct: 39 KKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4) HSP 1 Score: 172.17 bits (435), Expect = 3.203e-56 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ +E R++PDG K + GPL Sbjct: 87 IRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206 HSP 2 Score: 67.781 bits (164), Expect = 3.203e-56 Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH Sbjct: 39 KKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_RAT (60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 5.444e-56 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ +E R++PDG K + GPL Sbjct: 87 IRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206 HSP 2 Score: 67.781 bits (164), Expect = 5.444e-56 Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH Sbjct: 39 KKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFH 86 The following BLAST results are available for this feature:
BLAST of CN181847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181847 ID=CN181847; Name=CN181847; organism=Citrus sinensis; type=EST; length=696bpback to top |