CN181847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.922e-55 Identity = 80/120 (66.67%), Postives = 95/120 (79.17%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ + R++PDG K + GPL Sbjct: 87 IRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPERGPL 206 HSP 2 Score: 67.781 bits (164), Expect = 5.922e-55 Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH Sbjct: 39 KKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 6.440e-54 Identity = 80/120 (66.67%), Postives = 96/120 (80.00%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQKI +S+KWGFTKF+ ++ ++ ++PDG K + HGPL Sbjct: 87 MRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPL 206 HSP 2 Score: 62.003 bits (149), Expect = 6.440e-54 Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP H+VS E E +SSEALEAARI NKYM K G+D FH Sbjct: 39 KKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_BOMMA (60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.859e-53 Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 +R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR D EALRRAKFKFPGRQKI VS+KWGFTK+ R ++ + + E R+ DG + HGPL Sbjct: 87 IRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPL 206 HSP 2 Score: 70.0922 bits (170), Expect = 1.859e-53 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ K GKD FH Sbjct: 39 KRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.476e-52 Identity = 76/120 (63.33%), Postives = 88/120 (73.33%), Query Frame = -3 Query: 191 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 550 LRVRVHPFHVLRINKMLSCAGADRLQ GMRGA+GKP G ARV IGQ++ SVR KDSN E LRRA++KFPG+QKII+S+KWGFT R +YL+ + + DG K L G L Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSL 206 HSP 2 Score: 70.0922 bits (170), Expect = 4.476e-52 Identity = 34/48 (70.83%), Postives = 37/48 (77.08%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK VDEFP CVHLVS E E +SSEALEAARI NKYM +G+DAFH Sbjct: 39 KKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.246e-45 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = -3 Query: 167 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRA 550 +RVRVHPFHV RINKMLSCAGADRLQ GMRGAFGKP G ARV IGQ L+S+R K + AL+RA +KF GRQ I S WGFT+ +Y++WK E + DGV+ K+L G L + + RA Sbjct: 87 IRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRLHRAKRVRA 214 HSP 2 Score: 61.6178 bits (148), Expect = 1.246e-45 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 +K D FP HL+S E+E + SEALEAARI NKYM K AGK+A+H Sbjct: 39 RKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.223e-43 Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 227 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDG 550 LR+RV+PFHVLRINKMLSCAGADRLQTGMRG+FGKP G ARV Q +LS+R K+S A EALRRAK KFPG QKI VS K+GFT ++ + RI+ G Sbjct: 87 LRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIILRG 194 HSP 2 Score: 65.4698 bits (158), Expect = 4.223e-43 Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 +K GV EFP V+ +S E+EN+S+EALEAARI NKYM K+AGKD FH Sbjct: 39 RKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.117e-22 Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 302 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 550 L++RV+P HVLR N + + AGADR+Q GMR AFGKP GT ARV GQ +++VR N HA+EALRRA KFP I+V + Sbjct: 84 LKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFPFPFTIVVDK 166 HSP 2 Score: 39.6614 bits (91), Expect = 1.117e-22 Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = -2 Query: 552 EFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 677 +F V LV+ E+ V+ ALEAAR+A N+Y+ K G+ +H Sbjct: 42 DFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYH 83
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_HYPBU (50S ribosomal protein L10e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl10e PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.783e-21 Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = -3 Query: 311 RVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRR--AKFKFPGRQKII 547 RVRV+P HVLR NKM++ AGADRLQ GMR AFGKP GT ARV GQ +L VR K + HA+EALRR +K P R ++I Sbjct: 90 RVRVYPHHVLRENKMMAFAGADRLQEGMRQAFGKPVGTAARVYPGQAVLEVRVKKEHLDHAKEALRRGASKLPLPSRIRVI 170 HSP 2 Score: 30.4166 bits (67), Expect = 5.783e-21 Identity = 13/43 (30.23%), Postives = 24/43 (55.81%), Query Frame = -2 Query: 549 EFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHF 677 ++ + V + E+ + ALEAAR+A +KY++ G + F Sbjct: 47 DYDYIVEVYVTERGQIRHNALEAARVAVHKYLSTTIGDQNYFF 89
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.801e-21 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = -3 Query: 308 RVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 547 R+RV+P HV+R NKM++ AGADRLQ GMR AFGKP GT ARV G V+L V + + + +EALRR KFP +I++ Sbjct: 87 RIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPLPSRIVI 166 HSP 2 Score: 34.2686 bits (77), Expect = 9.801e-21 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = -2 Query: 549 LVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHF 656 LV E + ALEAARIA NKY+A G F+F Sbjct: 51 LVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYF 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_THENV (50S ribosomal protein L10e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.739e-20 Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = -3 Query: 299 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 550 LR+ P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ K + H +EALRRA K P +I++ K Sbjct: 88 LRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLPLPTRIVIEAK 171 HSP 2 Score: 37.3502 bits (85), Expect = 4.739e-20 Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = -2 Query: 531 FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHFASEGAP 674 FP LV E+ + +ALEAAR KY++KY G ++ E P Sbjct: 47 FPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVP 94 The following BLAST results are available for this feature:
BLAST of CN181847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181847 ID=CN181847; Name=CN181847; organism=Citrus sinensis; type=EST; length=696bpback to top |