CN181847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SULIM (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 314 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 535 +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 90 YPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SULIL (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 314 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 535 +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 90 YPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 314 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 535 +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 90 YPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 314 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 535 +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 90 YPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 7.509e-12 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = -3 Query: 302 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 550 +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 87 MQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169 HSP 2 Score: 30.0314 bits (66), Expect = 7.509e-12 Identity = 13/39 (33.33%), Postives = 25/39 (64.10%), Query Frame = -2 Query: 564 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGK 680 D++P + LV E+ + +LEAAR++ N+++ K G+ Sbjct: 44 DDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGE 82
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 7.509e-12 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = -3 Query: 302 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 550 +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 87 MQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169 HSP 2 Score: 30.0314 bits (66), Expect = 7.509e-12 Identity = 13/39 (33.33%), Postives = 25/39 (64.10%), Query Frame = -2 Query: 564 DEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGK 680 D++P + LV E+ + +LEAAR++ N+++ K G+ Sbjct: 44 DDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGE 82
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = -3 Query: 314 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 535 +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G+ L+ ++ K + A+EAL+ A K P R +I Sbjct: 90 YPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.673e-11 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = -3 Query: 305 VRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRA--KFKFPGR------QKIIVS 544 +R P +LR NK + AGADR+ GMR AFGKP GT AR+ + + ++ C+ ++ A++ LRRA K P R QK+++S Sbjct: 89 LRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176 HSP 2 Score: 28.4906 bits (62), Expect = 4.673e-11 Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = -2 Query: 555 GVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAF 686 G ++P + L E+ + +LE+AR++ N+ M K G+D + Sbjct: 42 GPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNY 85 The following BLAST results are available for this feature:
BLAST of CN181847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181847 ID=CN181847; Name=CN181847; organism=Citrus sinensis; type=EST; length=696bpback to top |