CN181842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_IDILO (Elongation factor Tu OS=Idiomarina loihiensis GN=tuf1 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 102/162 (62.96%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 R G+ ++VG+K+T TVTGVEMF+K LDE AG+N+G LLRG ++ D++RG VLAKPGTITPHTKF A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG V + E +MVMPGD +K VV+LI P+A ++G+RFAIREGG+TVGAGV+ I++ Sbjct: 238 RTGDECEIVGMKDTTKTTVTGVEMFRKLLDEGRAGENIGALLRGTKRDDVERGQVLAKPGTITPHTKFEAEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAV-----ELPEGVEMVMPGDNLKFVVDLIAPIAMDEGLRFAIREGGRTVGAGVVSKIMD 394
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_ECOLI (Elongation factor Tu OS=Escherichia coli (strain K12) GN=tufA PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_ECOL6 (Elongation factor Tu OS=Escherichia coli O6 GN=tufA PE=3 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_ECO57 (Elongation factor Tu OS=Escherichia coli O157:H7 GN=tufA PE=3 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 103/162 (63.58%), Postives = 127/162 (78.40%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 ++ E V++VG+K TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPGTI PHTKF A VY+L+KEEGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 237 KINEEVEIVGIKPTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGTIKPHTKFKAEVYILRKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSVDVELIVPIAMDENLRFAIREGGRTVGAGSVTKIIE 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHACO (Elongation factor Tu, chloroplastic OS=Chara connivens GN=tufA PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 97/158 (61.39%), Postives = 133/158 (84.18%), Query Frame = -3 Query: 229 RVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVI 699 ++G+ V+L+GL E R+ VTG+EMF++ L++ AG+N+G+LLRG++K DI+RGMV+A+PGTI PHT+F A VY+L+KEEGGRHSPFFAGYRPQF++RT DVTG + + D ++++MVMPGDRVKM+V LI P+A E+ MRFAIREGG+T+GAGV+ Sbjct: 248 KLGDIVELIGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVIAQPGTIEPHTRFEAQVYILRKEEGGRHSPFFAGYRPQFFVRTADVTGVIEAFEYDNGDKTRMVMPGDRVKMIVNLICPIAIEKKMRFAIREGGRTIGAGVV 405
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU2_SHISS (Elongation factor Tu 2 OS=Shigella sonnei (strain Ss046) GN=tuf2 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU2_SHIF8 (Elongation factor Tu 2 OS=Shigella flexneri serotype 5b (strain 8401) GN=tuf2 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU2_ECOUT (Elongation factor Tu 2 OS=Escherichia coli (strain UTI89 / UPEC) GN=tuf2 PE=3 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU2_ECOLC (Elongation factor Tu 2 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tuf2 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 238 KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393 The following BLAST results are available for this feature:
BLAST of CN181842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181842 ID=CN181842; Name=CN181842; organism=Citrus sinensis; type=EST; length=701bpback to top |