CN181842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51 Identity = 100/162 (61.73%), Postives = 123/162 (75.93%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ V++VG+KETR TVTGVEMFQK L++ AGDNVGLLLRGV K DI+RG VL+ PGTITPH KF A +Y L KEEGGRH PFF GYRPQF+ RTTDVTG V+ E +MVMPGD V ++VELI +A ++ + FA+REGG+TV +G I I+E Sbjct: 239 KVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLSAPGTITPHKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTGVVAL------EGKEMVMPGDNVDIIVELISSIAMDKNVEFAVREGGRTVASGRILEILE 394
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_ACICJ (Elongation factor Tu OS=Acidiphilium cryptum (strain JF-5) GN=tuf PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51 Identity = 99/160 (61.88%), Postives = 123/160 (76.88%), Query Frame = -3 Query: 220 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 699 +VG+ V++VGLK T TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VLA PG+ITPHT F VY+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E +MVMPGD V + VELI P+A ++G+RFAIREGG+TVG+GV+ SI Sbjct: 239 KVGDEVEIVGLKATVKTTVTGVEMFRKLLDQGEAGDNIGALLRGTKREDVERGQVLAAPGSITPHTNFSGSVYILNKEEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPEGVEMVMPGDNVTVSVELIAPIAMDEGLRFAIREGGRTVGSGVVASI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU2_WOLPM (Elongation factor Tu 2 OS=Wolbachia pipientis wMel GN=tuf2 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51 Identity = 95/162 (58.64%), Postives = 127/162 (78.40%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 + GE ++++GLK T+ TGVEMF+K LD+ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQFY+RTTDVTG + + + +MVMPGD V + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 234 KTGEEIEIIGLKATQKTICTGVEMFKKLLDKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----DGKEMVMPGDNVSVEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 390
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU1_WOLPM (Elongation factor Tu 1 OS=Wolbachia pipientis wMel GN=tuf1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51 Identity = 95/162 (58.64%), Postives = 127/162 (78.40%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 + GE ++++GLK T+ TGVEMF+K LD+ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQFY+RTTDVTG + + + +MVMPGD V + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 234 KTGEEIEIIGLKATQKTICTGVEMFKKLLDKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----DGKEMVMPGDNVSVEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 390
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_THIDA (Elongation factor Tu OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tuf1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51 Identity = 97/162 (59.88%), Postives = 124/162 (76.54%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE +++VG+ T T TGVEMF+K LD+ AGDNVG+LLRG ++ ++QRG VLAKPG+I PHTKF A +YVL K+EGGRH+PFF GYRPQFY RTTDVTG + + ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 240 KVGEEIEIVGITPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVQRGQVLAKPGSIKPHTKFSAEIYVLSKDEGGRHTPFFNGYRPQFYFRTTDVTGSI-----ELPAGTEMVMPGDNVSIKVSLIQPIAMDEGLRFAIREGGRTVGAGVVAKIEE 396
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_SHESA (Elongation factor Tu OS=Shewanella sp. (strain ANA-3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51 Identity = 97/160 (60.62%), Postives = 123/160 (76.88%), Query Frame = -3 Query: 220 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 699 RVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+ I Sbjct: 238 RVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_RHIL3 (Elongation factor Tu OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=tuf1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51 Identity = 95/162 (58.64%), Postives = 125/162 (77.16%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG++ T TVTGVEMF+K LD+ AGDN+G L+RGV + ++RG +L KPG++ PH KF+A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E Sbjct: 235 KVGEEVEIVGIRPTTKTTVTGVEMFRKLLDQGQAGDNIGALIRGVTRDGVERGQILCKPGSVKPHKKFMAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNVTVSVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_DESAH (Elongation factor Tu OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=tuf PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51 Identity = 100/162 (61.73%), Postives = 123/162 (75.93%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 + GE V+LVG+++T TGVEMF+K LDE AGDNVGLLLRG ++ ++RG V+AKPGTITPHTKF A +Y L KEEGGRH+PFF+GYRPQF+ RTTDVTG +S E +M+MPGD + ELI P+A E+ +RFAIREGG+TVGAGVI IIE Sbjct: 241 KTGEEVELVGIRDTTKTICTGVEMFRKLLDEGRAGDNVGLLLRGTKRDAVERGQVVAKPGTITPHTKFKAEIYCLSKEEGGRHTPFFSGYRPQFFFRTTDVTGVLS-----LPEGVEMIMPGDNAAITAELIAPIAMEKELRFAIREGGRTVGAGVIGEIIE 397
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_BARHE (Elongation factor Tu OS=Bartonella henselae GN=tuf1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51 Identity = 96/162 (59.26%), Postives = 124/162 (76.54%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V+++G++ T TVTGVEMF+K LD+ AGDN+G LLRG+ + I+RG VLAKP ++TPHT+F A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD V M V LI+P+A E+ +RFAIREGG+TVGAG++ IIE Sbjct: 235 KVGEEVEIIGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALLRGIDREGIERGQVLAKPASVTPHTRFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNVAMDVSLIVPIAMEEKLRFAIREGGRTVGAGIVSKIIE 391
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESR (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51 Identity = 97/160 (60.62%), Postives = 123/160 (76.88%), Query Frame = -3 Query: 220 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 699 RVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+ I Sbjct: 238 RVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392 The following BLAST results are available for this feature:
BLAST of CN181842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181842 ID=CN181842; Name=CN181842; organism=Citrus sinensis; type=EST; length=701bpback to top |