CN181842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62 Identity = 110/162 (67.90%), Postives = 139/162 (85.80%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 ++ ETV+LVGL+ETR TVTG+EMF+K+L+E +AGDN GLLLRG++K D++RGMV+AKPG+ITPHTKF VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG ++S +D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 248 KLNETVELVGLRETRTTTVTGIEMFKKSLEEGIAGDNAGLLLRGLKKEDVERGMVIAKPGSITPHTKFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTITSFTSDDGSAAEMVMPGDRIKMTVELIQPIAIEQGMRFAIREGGRTIGAGVVSKIIE 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP8 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 8801) GN=tuf PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.051e-61 Identity = 111/162 (68.52%), Postives = 138/162 (85.19%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGETV++VG++ T + TVTGVEMFQKTL+E +AGDNVGLLLRGV+K DI+RGMV+AKPG+ITPHT+F VYVL KEEGGRH+PFF Y+PQFY+RTTDVTG + +D+ E +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 248 KVGETVEIVGIRATSSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVKKEDIERGMVIAKPGSITPHTQFEGEVYVLTKEEGGRHTPFFKNYKPQFYVRTTDVTGSIVDYTSDEGETVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILK 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_BIGNA (Elongation factor Tu, chloroplastic OS=Bigelowiella natans GN=tufA PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.051e-61 Identity = 109/162 (67.28%), Postives = 142/162 (87.65%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 ++G+ V++VGL+ETR+ TVTG+EMFQK L E++AGDNVG+LLRG+QKADIQRGMV+A+PG+ITPH F A VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S+ +D+D E +MV+PGDRV M VEL+ P+A E+GMRFAIREGG+TVGAGV+ +++ Sbjct: 248 KIGDVVEIVGLRETRSTTVTGLEMFQKMLQESIAGDNVGMLLRGIQKADIQRGMVVAQPGSITPHVSFDAQVYILTKEEGGRHTPFFKGYRPQFYVRTTDVTGKIESLKSDEDNTEMRMVVPGDRVTMSVELVQPIAIEKGMRFAIREGGRTVGAGVVSNVV 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61 Identity = 113/162 (69.75%), Postives = 135/162 (83.33%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG++E R TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD ++M ELI PVA E GMRFAIREGG+T+GAGV+ IIE Sbjct: 238 KVGEEVEVVGIREPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQMTGELICPVAMELGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.793e-61 Identity = 112/162 (69.14%), Postives = 135/162 (83.33%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG+++ R TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD ++M ELI PVA E GMRFAIREGG+T+GAGV+ IIE Sbjct: 238 KVGEEVEVVGIRDPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQMTGELICPVAMEMGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAT (Elongation factor Tu, chloroplastic OS=Chlorokybus atmophyticus GN=tufA PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.814e-61 Identity = 111/163 (68.10%), Postives = 138/163 (84.66%), Query Frame = -3 Query: 214 RVGETVDLVGLKETR-NFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE +++VGL+E VTG+EMFQKTL+E++AGDNVG+LLRG+QK DI+RGMVLAKPGTI PH F A VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S D E++MVMPGDR+KMVV+LI P+A E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 248 KVGEAIEIVGLREAPVTSIVTGLEMFQKTLEESVAGDNVGILLRGIQKKDIERGMVLAKPGTIKPHKSFEAQVYILNKEEGGRHTPFFQGYRPQFYVRTTDVTGKIESFQADDGSETQMVMPGDRIKMVVQLIQPIAIEKGMRFAIREGGRTVGAGVVFNILE 410
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_PROMM (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9313) GN=tuf PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.900e-61 Identity = 109/160 (68.12%), Postives = 134/160 (83.75%), Query Frame = -3 Query: 214 GETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 693 GE +++VG++++R TVTGVEMF+K LDE +AGDN GLLLRG++K DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 240 GEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_PSEAK (Elongation factor Tu, chloroplastic OS=Pseudendoclonium akinetum GN=tufA PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.518e-60 Identity = 111/162 (68.52%), Postives = 134/162 (82.72%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 + G TV+++GL++T TVTG+EMFQKTLDE +AGDNVG+LLRGVQK +IQRGMVLA PGTI PHTKF A VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S D E+ M GDR+KMVVELI P+A E GMRFAIREGG+TVGAGV+ +I++ Sbjct: 248 KTGATVEIIGLRDTTTTTVTGLEMFQKTLDETVAGDNVGVLLRGVQKDNIQRGMVLAAPGTIKPHTKFEAQVYILTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFTADDGSEALMATSGDRLKMVVELIQPIAVENGMRFAIREGGRTVGAGVVSTILK 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_MICAN (Elongation factor Tu OS=Microcystis aeruginosa (strain NIES-843) GN=tuf PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.518e-60 Identity = 109/162 (67.28%), Postives = 133/162 (82.10%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ V+LVG++ETR TVTG+EMF+K+LD+ MAGDN G+LLRG+QK DI+RGMV+AKPGTI PHT+F VYVL KEEGGRH+PFF YRPQFY+RTTDVTG + D +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+G+GVI II+ Sbjct: 248 KVGDNVELVGIRETRPTTVTGIEMFKKSLDQGMAGDNAGILLRGIQKTDIERGMVIAKPGTIKPHTQFEGEVYVLSKEEGGRHTPFFKNYRPQFYVRTTDVTGTIQDYTADDGSTVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGSGVISKIIK 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.983e-60 Identity = 108/160 (67.50%), Postives = 134/160 (83.75%), Query Frame = -3 Query: 214 GETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 693 GE +++VG++++R TVTGVEMF+K LDE +AGDN GLLLRG++K DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 240 GEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIQ 399 The following BLAST results are available for this feature:
BLAST of CN181842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181842 ID=CN181842; Name=CN181842; organism=Citrus sinensis; type=EST; length=701bpback to top |