CN181842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMF (Elongation factor Tu OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tuf1 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.796e-57 Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = -3 Query: 217 VGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 696 VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 239 VGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMB (Elongation factor Tu OS=Neisseria meningitidis serogroup B GN=tufA PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.796e-57 Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = -3 Query: 217 VGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 696 VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 239 VGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMA (Elongation factor Tu OS=Neisseria meningitidis serogroup A GN=tufA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.796e-57 Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = -3 Query: 217 VGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 696 VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 239 VGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_NEIG1 (Elongation factor Tu OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tuf1 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.268e-56 Identity = 106/160 (66.25%), Postives = 130/160 (81.25%), Query Frame = -3 Query: 217 VGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 696 VG+ +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ ++ +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 239 VGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEKGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CODFR (Elongation factor Tu, chloroplastic OS=Codium fragile GN=tufA PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.600e-56 Identity = 105/162 (64.81%), Postives = 132/162 (81.48%), Query Frame = -3 Query: 214 VGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 696 VG+TV+LVGLK T+ +TG+EMF KTL++++AGDNVG+LLR +QK +IQRGMVLAKP +I PH F A VY+LKKEEGGRH+ FFAGYRPQFY+RTTDVTG + + D + +MVMPGDR++M VELI P+A E MRFAIREGGKTVGAGV+ +I++ Sbjct: 248 VGQTVELVGLKNTKEAIITGLEMFHKTLEKSVAGDNVGILLRRIQKEEIQRGMVLAKPSSILPHQHFKAQVYILKKEEGGRHTSFFAGYRPQFYVRTTDVTGHIKTFQGKIDNTQIQMVMPGDRIQMEVELIRPIAIETRMRFAIREGGKTVGAGVVTTIVQ 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSL (Elongation factor Tu OS=Geobacter sulfurreducens GN=tuf1 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.126e-55 Identity = 106/162 (65.43%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V D ++MVMPGD V + + LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 240 KVGEEVEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGVV-----DLPAGTEMVMPGDNVAVTINLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_SORC5 (Elongation factor Tu OS=Sorangium cellulosum (strain So ce56) GN=tuf1 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55 Identity = 106/161 (65.84%), Postives = 126/161 (78.26%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VG+ V ++G K+T+ VTGVEMF+K LD+ AGDNVG LLRGV+K +I+RG VLAKPG+ITPHTKF VYVLKKEEGGRH+PFF YRPQFY+RTTDVTG V + E KMVMPGD + M +ELI PVA E+ MRFAIREGGKTVGAGV+ I+ Sbjct: 240 KVGDEVQIIGFKDTKKSVVTGVEMFRKLLDQGQAGDNVGCLLRGVEKEEIERGQVLAKPGSITPHTKFTGEVYVLKKEEGGRHTPFFTNYRPQFYIRTTDVTGTV-----NLPEGVKMVMPGDNITMTIELIAPVALEEQMRFAIREGGKTVGAGVVTKIL 395
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55 Identity = 103/162 (63.58%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 ++GE V++VG+K TR VTG+EMFQKTLD+ AGDN G+L RGV K +++RGMV+AKPGTITPHTKF A VY+LKKEEGGRH+PFF YRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 237 KIGEEVEIVGIKPTRKSVVTGIEMFQKTLDQGQAGDNAGILFRGVDKEELERGMVIAKPGTITPHTKFKAEVYILKKEEGGRHTPFFNNYRPQFYFRTTDVTGAVT-----LPEGVEMVMPGDNLSVEVELIVPIAMDENLRFAIREGGRTVGAGTVTQIIE 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_HERAU (Elongation factor Tu OS=Herpetosiphon aurantiacus GN=tuf PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55 Identity = 104/162 (64.20%), Postives = 131/162 (80.86%), Query Frame = -3 Query: 217 RVGETVDLVGL-KETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VG+T++++G+ + R VTGVEMF+K LDE AGDNVG LLRG+++ D++RG VLAKPG+I PHTKF A VYVLKKEEGGRHSPFF+GYRPQFY+RTTDVTG + E +MVMPGD ++M VELI+PVA EQG++FAIREGG+TVGAG++ II Sbjct: 243 KVGDTIEIIGMGPDVRTTAVTGVEMFKKLLDEGRAGDNVGALLRGIERTDVERGQVLAKPGSIKPHTKFKAEVYVLKKEEGGRHSPFFSGYRPQFYVRTTDVTGAIG-----LPEGVEMVMPGDNIQMTVELIVPVAIEQGLKFAIREGGRTVGAGIVPEII 399
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHRVO (Elongation factor Tu OS=Chromobacterium violaceum GN=tuf1 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55 Identity = 106/161 (65.84%), Postives = 129/161 (80.12%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE +++VGLK+T T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL K+EGGRH+PFFA YRPQFY RTTDVTG +S E +MVMPGD V++ VELI P+A E+G+RFAIREGG+TVGAGV+ II Sbjct: 240 KVGEELEIVGLKDTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFEASVYVLSKDEGGRHTPFFANYRPQFYFRTTDVTGAISLA-----EGVEMVMPGDNVEIKVELIAPIAMEEGLRFAIREGGRTVGAGVVAKII 395 The following BLAST results are available for this feature:
BLAST of CN181842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181842 ID=CN181842; Name=CN181842; organism=Citrus sinensis; type=EST; length=701bpback to top |