CN181842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_AERS4 (Elongation factor Tu OS=Aeromonas salmonicida (strain A449) GN=tuf1 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55 Identity = 104/161 (64.60%), Postives = 130/161 (80.75%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGETV++VG+K+T + T TGVEMF+K LDE AG+N+G LLRGV++ D++RG VLAKPG+I PHTKF + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ S+I Sbjct: 238 KVGETVEIVGIKDTVSTTCTGVEMFRKLLDEGRAGENIGALLRGVKREDVERGQVLAKPGSIKPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIAPIAMDDGLRFAIREGGRTVGAGVVASVI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_GEOMG (Elongation factor Tu OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tuf1 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.920e-55 Identity = 106/162 (65.43%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLA+PG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V D ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 240 KVGEEVEIVGIKTTTKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLARPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CAMHC (Elongation factor Tu OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=tuf PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.920e-55 Identity = 107/161 (66.46%), Postives = 128/161 (79.50%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VG+TV+LVG+K T+ TVTGVEMF+K LDE AGDNVG+LLRG K D++RGMVLAKP +ITPHTKF A VY+L KEEGGRH+PFF YRPQFY+RTTDVTG + E ++MVMPGD VK+ VELI P+A EQG RFAIREGG TVG+GV+ I+ Sbjct: 243 KVGDTVELVGIKPTQTTTVTGVEMFRKELDEGEAGDNVGVLLRGTAKEDVERGMVLAKPKSITPHTKFEAEVYILTKEEGGRHTPFFNNYRPQFYVRTTDVTGSI-----QLPEGTEMVMPGDNVKITVELIHPIALEQGTRFAIREGGHTVGSGVVSKIL 398
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_PELPD (Elongation factor Tu OS=Pelobacter propionicus (strain DSM 2379) GN=tuf1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 105/162 (64.81%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRG+++ +I+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V D ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 240 KVGEEVEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGIKREEIERGQVLAKPGSITPHTKFKAEAYILNKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_NITSB (Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 104/162 (64.20%), Postives = 131/162 (80.86%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ +++VGL+ T+ TVTGVEMF+K LD+ AGDNVG+LLRG +K +++RG VLA+PGTITPHTKF A +YVL KEEGGRH+PFF+GYRPQFY+RTTDVTG ++ E +MVMPGD VK+ ELI P+A E+G RFAIREGG+TVGAGV+ IIE Sbjct: 243 KVGDEIEIVGLRPTQKTTVTGVEMFRKELDQGEAGDNVGVLLRGTKKEEVERGQVLAQPGTITPHTKFEAEIYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGTIT-----LPEGVEMVMPGDNVKINAELIAPIALEEGTRFAIREGGRTVGAGVVSKIIE 399
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 106/162 (65.43%), Postives = 127/162 (78.40%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 240 KVGEEVEIVGMKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIVELAAG-----TEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CYCME (Elongation factor Tu, chloroplastic OS=Cyclotella meneghiniana GN=tufA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 101/162 (62.35%), Postives = 127/162 (78.40%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +V + V++VG+ +T+ T+TG+EMFQKTL+E AGDNVG+LLRGV + +I+RGMVLAKPGTITPHT F + VYVL KEEGGRH+PFF GY P FY+ TTDVTG + D +MVMPGDR+KM ELI PVA E+GMRF IREGG+T+GAGV+ I++ Sbjct: 248 KVVDNVEIVGIGDTKTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLAKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYSPIFYVITTDVTGSIDQFTADDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFVIREGGRTIGAGVVSKIVK 409
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHAVU (Elongation factor Tu, chloroplastic OS=Chara vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 98/163 (60.12%), Postives = 136/163 (83.44%), Query Frame = -3 Query: 214 RVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 ++G+ V+L+GL E R+ VTG+EMF++ L++ AG+N+G+LLRG++K DI+RGMV+A+PGTI PHT+F A VY+L+KEEGGRHSPFFAGYRPQF++RT DVTG + + D ++++MVMPGDRVKM+V LI P+A E+ MRFAIREGG+T+GAGV+ I++ Sbjct: 248 KLGDIVELIGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVIAQPGTIEPHTRFEAQVYILRKEEGGRHSPFFAGYRPQFFVRTADVTGVIEAFEYDNGDKTRMVMPGDRVKMIVNLICPIAIEKKMRFAIREGGRTIGAGVVLQILD 410
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU2_THETN (Elongation factor Tu-B OS=Thermoanaerobacter tengcongensis GN=tufB PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 107/163 (65.64%), Postives = 131/163 (80.37%), Query Frame = -3 Query: 214 RVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ V+++GL E+R VTGVEMF+KTLDEA AGDN+G+LLRG+QK +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD V + VELI P+A E+G++FAIREGG+TVGAGV+ +IIE Sbjct: 243 KVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQKDEVERGQVLAKPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----QLPEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE 400
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_PELPB (Elongation factor Tu OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55 Identity = 104/162 (64.20%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 ++ E V++VGL+ TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPGTI PHTKF A VY+LKKEEGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + VEL+ P+A ++G+RFAIREGG+TVGAG + +IIE Sbjct: 237 KINEEVEIVGLRPTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGTIKPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLGVEVELLAPIAMDEGLRFAIREGGRTVGAGSVTTIIE 393 The following BLAST results are available for this feature:
BLAST of CN181842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181842 ID=CN181842; Name=CN181842; organism=Citrus sinensis; type=EST; length=701bpback to top |