CN181842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_COXBU (Elongation factor Tu OS=Coxiella burnetii GN=tufA PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55 Identity = 102/162 (62.96%), Postives = 130/162 (80.25%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ +++VG+K+T T TGVEMF+K LDE AGDNVG+LLRG ++ +++RG VLAKPG+ITPH KF A +YVL KEEGGRH+PF GYRPQFY RTTDVTG++ S+ E +MVMPGD VK+ VELI PVA ++G+RFA+REGG+TVGAGV+ IIE Sbjct: 240 KVGDEIEIVGIKDTTKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHKKFEAEIYVLSKEEGGRHTPFLQGYRPQFYFRTTDVTGQLLSL----PEGIEMVMPGDNVKVTVELIAPVAMDEGLRFAVREGGRTVGAGVVTKIIE 397
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_COXBR (Elongation factor Tu OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tuf1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55 Identity = 102/162 (62.96%), Postives = 130/162 (80.25%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ +++VG+K+T T TGVEMF+K LDE AGDNVG+LLRG ++ +++RG VLAKPG+ITPH KF A +YVL KEEGGRH+PF GYRPQFY RTTDVTG++ S+ E +MVMPGD VK+ VELI PVA ++G+RFA+REGG+TVGAGV+ IIE Sbjct: 240 KVGDEIEIVGIKDTTKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHKKFEAEIYVLSKEEGGRHTPFLQGYRPQFYFRTTDVTGQLLSL----PEGIEMVMPGDNVKVTVELIAPVAMDEGLRFAVREGGRTVGAGVVTKIIE 397
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_COXBN (Elongation factor Tu OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tuf1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55 Identity = 102/162 (62.96%), Postives = 130/162 (80.25%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ +++VG+K+T T TGVEMF+K LDE AGDNVG+LLRG ++ +++RG VLAKPG+ITPH KF A +YVL KEEGGRH+PF GYRPQFY RTTDVTG++ S+ E +MVMPGD VK+ VELI PVA ++G+RFA+REGG+TVGAGV+ IIE Sbjct: 240 KVGDEIEIVGIKDTTKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHKKFEAEIYVLSKEEGGRHTPFLQGYRPQFYFRTTDVTGQLLSL----PEGIEMVMPGDNVKVTVELIAPVAMDEGLRFAVREGGRTVGAGVVTKIIE 397
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_ACTSZ (Elongation factor Tu OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=tuf1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55 Identity = 103/162 (63.58%), Postives = 129/162 (79.63%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 R G+ V++VG+K+T TVTGVEMF+K LDE AG+N+G LLRG ++ +I+RG VLAKPG+ITPHT F++ VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD VKM V LI P+A +QG+RFAIREGG+TVGAGV+ S+I+ Sbjct: 238 RTGDEVEIVGIKDTTKTTVTGVEMFRKLLDEGRAGENIGALLRGTKREEIERGQVLAKPGSITPHTDFVSEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVKMTVSLIHPIAMDQGLRFAIREGGRTVGAGVVASVIK 394
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.587e-55 Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = -3 Query: 214 RVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ V+++GL+ E R VTGVEMF+K LDEA+AGDN+G LLRGV + +++RGMVLAKPG+I PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG V + E +MVMPGD ++M +ELI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 243 KVGDEVEIIGLRDEIRKTVVTGVEMFRKILDEAVAGDNIGTLLRGVDRKEVERGMVLAKPGSIKPHTKFNAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVV-----NLPEGVEMVMPGDNIRMTIELITPIAIEEGLRFAIREGGRTVGAGVVTGIIE 400
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTE (Elongation factor Tu OS=Chlorobium tepidum GN=tuf PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.587e-55 Identity = 105/162 (64.81%), Postives = 127/162 (78.40%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ V++VG+K T VTG+EMFQKTLDE AGDN GLLLRGV K ++RGMV+AKPG+ITPHTKF A VY+LKKEEGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + VELI P+A E+ +RFAIREGG+TVGAG + I+E Sbjct: 237 KVGDEVEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSIDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_CHLL2 (Elongation factor Tu OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=tuf PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.587e-55 Identity = 103/162 (63.58%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 ++ E V++VG+K TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPG+I PHTKF A VY+L+KEEGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++G+RFAIREGG+TVGAG + IIE Sbjct: 237 KINEEVEIVGIKPTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGSIKPHTKFKAEVYILRKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSVEVELIVPIAMDEGLRFAIREGGRTVGAGSVTKIIE 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_AERHH (Elongation factor Tu OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tuf1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.587e-55 Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = -3 Query: 217 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 699 +VGE V++VG+K+T T TGVEMF+K LDE AG+N+G LLRGV++ D++RG VLAKPGTI PHTKF + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 238 KVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENIGALLRGVKREDVERGQVLAKPGTIKPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIAPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU1_THETN (Elongation factor Tu-A OS=Thermoanaerobacter tengcongensis GN=tufA PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.587e-55 Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = -3 Query: 214 RVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VG+ V+++GL E+R VTGVEMF+KTLDEA AGDN+G+LLRG+Q+ +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD V + VELI P+A E+G++FAIREGG+TVGAGV+ +IIE Sbjct: 243 KVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLAKPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----QLPEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE 400
BLAST of CN181842 vs. ExPASy Swiss-Prot
Match: EFTU_NITOC (Elongation factor Tu OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=tuf1 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.297e-55 Identity = 100/162 (61.73%), Postives = 128/162 (79.01%), Query Frame = -3 Query: 214 RVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 699 +VGE +++VG++ET+ TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKP +ITPHTKF A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG + D + +MVMPGD ++M V LI P+A E+G+RFA+REGG+TVGAGV+ +IE Sbjct: 240 KVGEEIEIVGMRETQKTICTGVEMFRKLLDEGRAGDNVGVLLRGTKREDVERGQVLAKPKSITPHTKFYAEVYVLSKDEGGRHTPFFTGYRPQFYFRTTDVTGAI-----DLPDGVEMVMPGDNIQMTVSLIAPIAMEEGLRFAVREGGRTVGAGVVSKVIE 396 The following BLAST results are available for this feature:
BLAST of CN181842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181842 ID=CN181842; Name=CN181842; organism=Citrus sinensis; type=EST; length=701bpback to top |