CN181841

Overview
NameCN181841
Unique NameCN181841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 5.819e-75
Identity = 130/171 (76.02%), Postives = 153/171 (89.47%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLR+ LVEHALNNG+ E+  ++SIFQKIAAFE+ELK +LPKEVE AR  +E+G+P IPNRIKECRSYPLY+FVRE LG+ +LTGEKV SPGEEF+KVFTAM +G+IIDP+LECL  WNGA
Sbjct:  543 SQVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRETLVEHALNNGDKERNLSTSIFQKIAAFEDELKALLPKEVETARAALESGNPAIPNRIKECRSYPLYKFVREELGTEYLTGEKVRSPGEEFEKVFTAMSKGEIIDPLLECLESWNGA 713          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 7.600e-75
Identity = 131/171 (76.61%), Postives = 154/171 (90.06%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAYIDDPCSA+ PLMQKLRQVLV+HAL+NG+ EK + +SIFQKI AFE+ELKT+LPKEVE AR  +E+G+  IPNRIKECRSYPLY+ VRE +G++ LTGEKV SPGEEFDKVFTAMC+GK+IDPMLECL+EWNGA
Sbjct:  545 SQVAKRVLTMGVNGELHPSRFCEKDLIKVVDREYVFAYIDDPCSASSPLMQKLRQVLVDHALDNGDREKNSTTSIFQKIGAFEDELKTLLPKEVEIARTELESGNAAIPNRIKECRSYPLYKIVREDIGTSLLTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEWNGA 715          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 9.926e-75
Identity = 132/171 (77.19%), Postives = 151/171 (88.30%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLRQVLVEHAL NGENEK A++SIFQKI AFEEELK +LPKEV++AR  +++GS  +PNRI ECRSYPLY+FVRE LG+ +LTGEKV SPGEE DKVFTA+C+GKIIDP+L+CL  WNGA
Sbjct:  542 SQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVEHALTNGENEKNASTSIFQKIVAFEEELKVLLPKEVDSARAALDSGSAGVPNRITECRSYPLYKFVREELGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGWNGA 712          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.296e-74
Identity = 132/171 (77.19%), Postives = 151/171 (88.30%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQV+K+VLT GA+GELHPSRFCEK+LLK  DRE+VFAY+DDPCSATYPLMQKLRQV V+HAL NGENEK  ++S+FQKI AFEEELK +LPKEVE+AR   ++G+  I N+IKECRSYPLY+FVRE LG+  LTGEKV SPGEEFDKVFTAMCQGKIIDPMLECL EWNG+
Sbjct:  540 SQVSKRVLTTGANGELHPSRFCEKELLKVVDREYVFAYVDDPCSATYPLMQKLRQVFVDHALENGENEKNFSTSVFQKIEAFEEELKALLPKEVESARAAYDSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSPGEEFDKVFTAMCQGKIIDPMLECLGEWNGS 710          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.693e-74
Identity = 135/171 (78.95%), Postives = 149/171 (87.13%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT+GA+GELHPSRFCEKDLL+  DRE+VF Y DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE ELK VLPKEVE+AR ++ENG+P I NRIKECRSYPLYRFVRE LG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  537 SQVAKRTLTMGANGELHPSRFCEKDLLRVVDREYVFRYADDACSANYPLMQKLRQVLVDHALENGENEKNANSSIFQKILAFEGELKAVLPKEVESARISLENGNPAIANRIKECRSYPLYRFVREELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.693e-74
Identity = 131/166 (78.92%), Postives = 150/166 (90.36%), Query Frame = -1
Query:  157 KVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 654
            +VLT+G +GELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPLMQKLRQVLVEHAL NGE  + + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+P IPNRIKECRSYPLY+FVRE LG++ LTGEKV SPGEEFDKVFTA+C GK+IDP+LECL+EW+GA
Sbjct:  540 RVLTMGFNGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLMQKLRQVLVEHALVNGEKVRNSTTSIFQKIGSFEEELKTLLPKEVESARLEVENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSPGEEFDKVFTAICAGKLIDPLLECLKEWDGA 705          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.693e-74
Identity = 131/171 (76.61%), Postives = 149/171 (87.13%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            +QVAK+ LTVGA+GELHP+RFCEKDLL+  DRE+VFAY DDPCSA YPLMQKLRQ LV+HAL NGENEK   +SIF K+AAFE+ELK VLPKEVE AR  VE+G+P IPNRIKECRSYPLY+FVREGLG+  LTGEKV SPGEE DKVFTAMC+G IIDP+LECL+ W+GA
Sbjct:  532 TQVAKRTLTVGANGELHPARFCEKDLLRVVDREYVFAYADDPCSANYPLMQKLRQALVDHALQNGENEKNTGTSIFLKVAAFEDELKAVLPKEVEAARIAVESGNPAIPNRIKECRSYPLYKFVREGLGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSWDGA 702          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.211e-74
Identity = 132/171 (77.19%), Postives = 151/171 (88.30%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            S VAK+ LT G +GELHPSRFCEKDLL+  DREHVF+YIDDPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+AR   ENG+ TI N+IKECRSYPLY+FVRE LG++ LTGEKV SPGEE DK+FTA+CQGKIIDP+LECL +WNGA
Sbjct:  549 SHVAKRTLTTGINGELHPSRFCEKDLLRVVDREHVFSYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESARGAYENGNTTISNKIKECRSYPLYKFVREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGA 719          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.211e-74
Identity = 130/171 (76.02%), Postives = 150/171 (87.72%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT G +GELHPSRFCEKDLL+  DREHVFAYIDDPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+ R   E+G+PT+PN+I  CRSYPLYRFVR+ LG+  LTGEKV SPGEE DK+FTA+CQGKIIDP+L+CL +WNGA
Sbjct:  548 SQVAKRTLTTGVNGELHPSRFCEKDLLRVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESTRAAYESGNPTVPNKINGCRSYPLYRFVRQELGTGLLTGEKVISPGEECDKLFTAICQGKIIDPLLQCLGDWNGA 718          
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.888e-74
Identity = 130/171 (76.02%), Postives = 150/171 (87.72%), Query Frame = -1
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT+GA+GELHP+RFCEK+LL+  DRE++FAY DDPCS  YPLMQKLRQVLV+HA+NNGE+EK  NSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+P IPNRI ECRSYPLYRFVR+ LG+  LTGEKV SPGEE DKVFTAMC G+IIDPMLECL+ WNGA
Sbjct:  540 SQVAKRTLTMGANGELHPARFCEKELLRIVDREYLFAYADDPCSCNYPLMQKLRQVLVDHAMNNGESEKNVNSSIFQKIGAFEDELKAVLPKEVESARAALESGNPAIPNRITECRSYPLYRFVRKELGTELLTGEKVRSPGEECDKVFTAMCNGQIIDPMLECLKSWNGA 710          
The following BLAST results are available for this feature:
BLAST of CN181841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PAL3_PETCR5.819e-7576.02Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PALY_CITLI7.600e-7576.61Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_PRUAV9.926e-7577.19Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PALY_POPTR1.296e-7477.19Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PAL3_TOBAC1.693e-7478.95Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_POPKI1.693e-7478.92Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL1_IPOBA1.693e-7476.61Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL2_PEA2.211e-7477.19Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PEA2.211e-7476.02Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL1_TOBAC2.888e-7476.02Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181841 ID=CN181841; Name=CN181841; organism=Citrus sinensis; type=EST; length=669bp
GAGGCCTTAAATGAAAAAACCAATAGAAGTGATTGAAATATTACAGATGG
ATTTGTACCACTGACTCGCATGGGCAAATTCTATGAACACAAGAACACAA
GGGATTGAAGACCATGTTATTAAACAAAATAAAAACAACTAACAAATTGG
AAGAGGGGCGCCATTCCATTCCCTGAGACATTCCAGCATTGGATCAATGA
TCTTGCCCTGGCACATTGCTGTAAAAACTTTGTCAAATTCCTCGCCGGGC
GATGTAACTTTTTCCCCTGTTAGAAAATTAGACCCGAGCCCCTCCCTCAC
GAACCTGTACAACGGGTAAGACCTGCATTCTTTGATCCTGTTGGGAATTG
TTGGACTTCCATTCTCAACAGTCTGCCTGGCATTCTCAACTTCTTTCGGC
AAAACGGTTTTCAATTCCTCCTCAAAGGCTGCAATCTTCTGGAAGATTGA
AGAGTTGGCAGTCTTCTCGTTCTCTCCATTGTTCAGTGCGTGCTCAACAA
GTACTTGCCTTAGCTTTTGCATCAATGGATAGGTAGCACTGCAGGGGTCA
TCAATGTATGCAAAGACGTGTTCGCGATCAGCCGCTTTGAGCAGATCCTT
CTCACAGAATCTTGATGGATGAAGCTCTCCACTAGCACCGACGGTTAAGA
CTTTCTTAGCTACTTGGCT
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