CN181841

Overview
NameCN181841
Unique NameCN181841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.926e-74
Identity = 131/171 (76.61%), Postives = 148/171 (86.55%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQV+K++LT G +GELHPSRFCEKDLLK  DRE++F+YIDDPCSATYPLMQKLRQVLV+HAL N E EK  NSSIFQKIA FEEELK +LPKEVE AR   E+G   IPN+I+ECRSYPLY+FVRE LG+  LTGEKV SPGEEFDK+FTAMCQGKIIDP++ECL EWNGA
Sbjct:  538 SQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYIFSYIDDPCSATYPLMQKLRQVLVDHALVNAECEKDVNSSIFQKIAIFEEELKNLLPKEVEGARAAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGA 708
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.434e-74
Identity = 129/171 (75.44%), Postives = 151/171 (88.30%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            S VAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQ LVEHAL NG+NE+  N+SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+FVR+ LG  +LTGEKVTSPGEEFDKVF AM +G+IIDP+LECL  WNGA
Sbjct:  541 SSVAKRVLTMGVNGELHPSRFCEKDLLRFVDREYIFAYIDDPCSATYPLMQKLRQTLVEHALKNGDNERNMNTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGIEYLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 8.403e-74
Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+P I NRIKECRSYPLYRFVR  LG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  537 SQVAKRTLTMGTNGELHPSRFCEKDLLRVVDREYVFAYADDACSANYPLMQKLRQVLVDHALQNGENEKNANSSIFQKILAFEDELKAVLPKEVESARAALESGNPAIANRIKECRSYPLYRFVRGELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.433e-73
Identity = 130/171 (76.02%), Postives = 147/171 (85.96%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLR+VL+EHAL NGE+EK A++SIFQKI AFEEELK +LPKEVE+AR  +E G+  +PNRI ECRSYPLY+FVRE LG  +LTGEKV SPGEE DKVF A+CQGKIIDP+L CL  WNGA
Sbjct:   60 SQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLREVLIEHALTNGESEKNASTSIFQKIGAFEEELKALLPKEVESARSAIEGGNAAVPNRIAECRSYPLYKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGA 230
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.433e-73
Identity = 131/171 (76.61%), Postives = 147/171 (85.96%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQV+K+ LT G +GELHPSRFCEKDLLK  DRE+VF+YIDDP S TYPLMQKLRQVLV+HAL N ENEK  N+SIFQKIA FEEELKT+LPKEVE+ R   E+G   IPN+IKECRSYPLY+FVRE LG+  LTGEKV SPGEEFDK+FTA+CQGKIIDP+LECL EWNGA
Sbjct:  331 SQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPYSGTYPLMQKLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKTILPKEVESTRAAYESGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGA 501
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.872e-73
Identity = 127/171 (74.27%), Postives = 152/171 (88.89%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            S VAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQ LVEHAL NG+NE+  ++SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+FVR+ LG+ +LTGEKVTSPGEEF+KVF AM +G+IIDP+LECL  WNGA
Sbjct:  541 SSVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQTLVEHALKNGDNERNLSTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.170e-73
Identity = 127/171 (74.27%), Postives = 149/171 (87.13%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+VLTVG +GELHPSRFCEKDLL   +RE+VFAYIDDPCSATYPLMQKLR VLV+HAL NG+ E  +++SIFQKI AFE+ELKT+LPKEVE+ R  VENG+P +PNRI ECRSYPLY+FVRE LG++ LTGEK+ SPGEE DKVF A+C G+ IDPML+CL+EWNGA
Sbjct:  543 SQVAKRVLTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLMQKLRHVLVDHALENGDREGNSSTSIFQKIGAFEQELKTLLPKEVESVRVDVENGNPAVPNRIIECRSYPLYKFVRENLGTSLLTGEKIRSPGEECDKVFAALCDGRFIDPMLDCLKEWNGA 713
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.447e-73
Identity = 130/171 (76.02%), Postives = 149/171 (87.13%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAY DDPCS+TYPLMQKLR V+VEHALNNG  EK +N+SIFQKI++FE ELK  LPKEVE AR   ENGSP I NRIK+CRSYPLY+FV+E +GS FLTGEKV SPGEEFDKVF A+C+GK IDPML+CL+EWNGA
Sbjct:  529 SQVAKRVLTMGVNGELHPSRFCEKDLIKVIDREYVFAYADDPCSSTYPLMQKLRAVIVEHALNNGVKEKDSNTSIFQKISSFENELKAALPKEVEAARAEFENGSPAIENRIKDCRSYPLYKFVKE-VGSGFLTGEKVVSPGEEFDKVFNAICEGKAIDPMLDCLKEWNGA 698
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.213e-72
Identity = 131/171 (76.61%), Postives = 147/171 (85.96%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT G +GELHPSRFCEK LLK  +RE+ FAYIDDPCS TYPLMQKLRQVLV++AL NGENEK  N+SIFQKIA+FEEELKT+LPKEVE AR   EN    IPN+IK+CRSYPLY+FVRE LG++ LTGEKV SPGEE DKVF+AMCQGKIIDP+LECL EWNGA
Sbjct:  537 SQVAKRTLTTGVNGELHPSRFCEKALLKVVEREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNLNTSIFQKIASFEEELKTLLPKEVEGARLAYENDQCAIPNKIKDCRSYPLYKFVREELGTSLLTGEKVISPGEECDKVFSAMCQGKIIDPLLECLGEWNGA 707
[Close]
BLAST of CN181841 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.703e-72
Identity = 129/171 (75.44%), Postives = 147/171 (85.96%), Query Frame = -1 
Query:  157 SQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 669
            SQVAK+ LT G +GELHPSRFCE DLL+  DRE+VFAY+DDPCSATYPLMQKLRQVLVEHAL NGENEK A++SIFQKI AFE ELK VLPKEVE+AR  +E+G P I NRI ECRSYPLY+F+RE LG+NFLTGEKV SPGEE D+VFTAM +G I+DP+L+CL  WNGA
Sbjct:  538 SQVAKRTLTTGVNGELHPSRFCELDLLRVVDREYVFAYVDDPCSATYPLMQKLRQVLVEHALKNGENEKNASTSIFQKIEAFEAELKAVLPKEVESARVALEDGKPAIANRITECRSYPLYKFIREELGTNFLTGEKVMSPGEECDRVFTAMSKGLIVDPLLKCLEGWNGA 708
The following BLAST results are available for this feature:
BLAST of CN181841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PAL1_SOYBN4.926e-7476.61Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL2_PETCR6.434e-7475.44Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL2_TOBAC8.403e-7477.78Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PALY_MALDO1.433e-7376.02Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PAL1_PHAVU1.433e-7376.61Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PAL1_PETCR1.872e-7374.27Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL2_CICAR4.170e-7374.27Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PALY_BROFI5.447e-7376.02Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL2_PHAVU1.213e-7276.61Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PALY_DIGLA2.703e-7275.44Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181841 ID=CN181841; Name=CN181841; organism=Citrus sinensis; type=EST; length=669bp
GAGGCCTTAAATGAAAAAACCAATAGAAGTGATTGAAATATTACAGATGG
ATTTGTACCACTGACTCGCATGGGCAAATTCTATGAACACAAGAACACAA
GGGATTGAAGACCATGTTATTAAACAAAATAAAAACAACTAACAAATTGG
AAGAGGGGCGCCATTCCATTCCCTGAGACATTCCAGCATTGGATCAATGA
TCTTGCCCTGGCACATTGCTGTAAAAACTTTGTCAAATTCCTCGCCGGGC
GATGTAACTTTTTCCCCTGTTAGAAAATTAGACCCGAGCCCCTCCCTCAC
GAACCTGTACAACGGGTAAGACCTGCATTCTTTGATCCTGTTGGGAATTG
TTGGACTTCCATTCTCAACAGTCTGCCTGGCATTCTCAACTTCTTTCGGC
AAAACGGTTTTCAATTCCTCCTCAAAGGCTGCAATCTTCTGGAAGATTGA
AGAGTTGGCAGTCTTCTCGTTCTCTCCATTGTTCAGTGCGTGCTCAACAA
GTACTTGCCTTAGCTTTTGCATCAATGGATAGGTAGCACTGCAGGGGTCA
TCAATGTATGCAAAGACGTGTTCGCGATCAGCCGCTTTGAGCAGATCCTT
CTCACAGAATCTTGATGGATGAAGCTCTCCACTAGCACCGACGGTTAAGA
CTTTCTTAGCTACTTGGCT
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