CN181835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 71/178 (39.89%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 162 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQ 182
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 71/178 (39.89%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 162 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQ 182
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 71/178 (39.89%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 162 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQ 182
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 68/173 (39.31%), Postives = 101/173 (58.38%), Query Frame = 3 Query: 168 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +YD+ T +SP GRL+QVEYAMEA+ +G+ S +V+ K +L S +K++++ D+I +AG+TAD +L ++R +Y +Y +PV +LV L ++ Q TQ KRP+GV LL G D+ G LY + PSGNY ++A IGS QAA T L+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLK 176
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 156 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 M Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L Q K+ + HIG+ +G+ D RVL R R Y Y+ P+P +LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLE 175
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 68/172 (39.53%), Postives = 98/172 (56.98%), Query Frame = 3 Query: 165 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLE 674 + Y +TT+SP+G+L Q+EYA+ AVK G ++GLR+K VVL N S L+ Q K+ ++ HIG +G+ D R+L + R + Y Y +P +LV +A Q TQ RP+G LL+AG D+ G L + C PSG YF ++A A+G AKT+LE Sbjct: 3 DHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLE 173
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 70/170 (41.18%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+G+ A+G+++ VVL + S L + +KIF++DDHIG A +GL AD R L R E +Y+ + V + ++ D Q TQ RPYG LL+AG+D+ L+ PSG EY+A AIG+ A E Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFE 178
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAVK+G+A++G+R+ +VL ++ S L + +KI K DDH+G+A AG AD R L + R + Y P+ + L + D Q TQ RP+GV LL+ G+++ LY PSG +E++A +IG+ + +LE Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLE 179
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 68/171 (39.77%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD T +SP G L+QV YA EAVK+G ++G+++ VV+ + L KI+K+DDHIGVA AG+ DGR+L Y R + + Y P PV + +AD Q TQ RP+GV L+ AG++ G +Y P G YF ++A AIGS Q A E Sbjct: 12 YDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFE 182
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26 Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIG-SRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAVK+G+ A+G++ +VL + NS+L S +KIFK+D+HIGVA +GL D R L R E +Y+ + V L +L D Q TQ RPYG LL+AG+ + L+ PSG EY+A IG R+ K + E Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEE 179 The following BLAST results are available for this feature:
BLAST of CN181835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181835 ID=CN181835; Name=CN181835; organism=Citrus sinensis; type=EST; length=675bpback to top |